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Editor-in-Chief
Melissa Norton, MD Biology Editor
Penelope Webb, PhD In-house Editor
Elizabeth Moylan
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 Latest Bioinformatics articles from BMC Biology The authors assigned these articles to Bioinformatics as the primary area of interest
Research article
 
Visualizing regulatory interactions in metabolic networks
Stephan Noack, Aljoscha Wahl, Ermir Qeli, Wolfgang Wiechert
BMC Biology 2007, 5:46 (16October2007)
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Software
Broadening the horizon  level 2.5 of the HUPO-PSI format for molecular interactions
Samuel Kerrien, Sandra Orchard, Luisa Montecchi-Palazzi, Bruno Aranda, Antony F Quinn, Nisha Vinod, Gary D Bader, Ioannis Xenarios, J r me Wojcik, David Sherman, Mike Tyers, John J Salama, Susan Moore, Arnaud Ceol, Andrew Chatr-aryamontri, Matthias Oesterheld, Volker St mpflen, Lukasz Salwinski, Jason Nerothin, Ethan Cerami, Michael E Cusick, Marc Vidal, Michael Gilson, John Armstrong, Peter Woollard, Christopher Hogue, David Eisenberg, Gianni Cesareni, Rolf Apweiler, Henning Hermjakob
BMC Biology 2007, 5:44 (9October2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Ab initio modeling of small proteins by iterative TASSER simulations
Sitao Wu, Jeffrey Skolnick, Yang Zhang
BMC Biology 2007, 5:17 (8May2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Methodology article
Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST
E Michael Gertz, Yi-Kuo Yu, Richa Agarwala, Alejandro A Sch ffer, Stephen F Altschul
BMC Biology 2006, 4:41 (7December2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
The effects of incomplete protein interaction data on structural and evolutionary inferences
Eric de Silva, Thomas Thorne, Piers Ingram, Ino Agrafioti, Jonathan Swire, Carsten Wiuf, Michael PH Stumpf
BMC Biology 2006, 4:39 (3November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Complete probabilistic analysis of RNA shapes
Bj rn Vo , Robert Giegerich, Marc Rehmsmeier
BMC Biology 2006, 4:5 (15February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Incorporation of gene-specific variability improves expression analysis using high-density DNA microarrays
Vikram Budhraja, Edward Spitznagel, W Timothy Schaiff, Yoel Sadovsky
BMC Biology 2003, 1:1 (28November2003)
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Other articles related to Bioinformatics from BMC Biology and BMC Medicine The authors assigned these articles to Bioinformatics as a secondary area of interest
Research article
Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags
Heesun Shin, Martin Hirst, Matthew N Bainbridge, Vincent Magrini, Elaine Mardis, Donald G Moerman, Marco A Marra, David L Baillie, Steven JM Jones
BMC Biology 2008, 6:30 (8July2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Characterization of the proneural gene regulatory network during mouse telencephalon development
Julia M Gohlke, Olivier Armant, Frederick M Parham, Marjolein V Smith, Celine Zimmer, Diogo S Castro, Laurent Nguyen, Joel S Parker, Gerard Gradwohl, Christopher J Portier, Fran ois Guillemot
BMC Biology 2008, 6:15 (31March2008)
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Research article
Spatial chemical conservation of hot spot interactions in protein-protein complexes
Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussinov, Haim J Wolfson
BMC Biology 2007, 5:43 (9October2007)
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Research article
FishNet: an online database of zebrafish anatomy
Robert J Bryson-Richardson, Silke Berger, Thomas F Schilling, Thomas E Hall, Nicholas J Cole, Abigail J Gibson, James Sharpe, Peter D Currie
BMC Biology 2007, 5:34 (17August2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [1 comment]
Research article
Accelerated gene evolution and subfunctionalization in the pseudotetraploid frog Xenopus laevis
Uffe Hellsten, Mustafa K Khokha, Timothy C Grammer, Richard M Harland, Paul Richardson, Daniel S Rokhsar
BMC Biology 2007, 5:31 (25July2007)
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Research article
Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring
Mehrdad Hajibabaei, Gregory AC Singer, Elizabeth L Clare, Paul DN Hebert
BMC Biology 2007, 5:24 (13June2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Correction
Correction: African American mitochondrial DNAs often match mtDNAs found in multiple African ethnic groups
Bert Ely, Jamie Lee Wilson, Fatimah Jackson, Bruce A Jackson
BMC Biology 2007, 5:13 (26March2007)
[Abstract] [Full text] [PDF]
Methodology article
The vertebrate phylotypic stage and an early bilaterian-related stage in mouse embryogenesis defined by genomic information
Naoki Irie, Atsuko Sehara-Fujisawa
BMC Biology 2007, 5:1 (12January2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology]
Research article
African-American mitochondrial DNAs often match mtDNAs found in multiple African ethnic groups
Bert Ely, Jamie Lee Wilson, Fatimah Jackson, Bruce A Jackson
BMC Biology 2006, 4:34 (12October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic
Daniel H Haft, Ian T Paulsen, Naomi Ward, Jeremy D Selengut
BMC Biology 2006, 4:29 (24August2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Gene expression in cortex and hippocampus during acute pneumococcal meningitis
Roney S Coimbra, Veronique Voisin, Antoine B de Saizieu, Raija LP Lindberg, Matthias Wittwer, David Leppert, Stephen L Leib
BMC Biology 2006, 4:15 (2June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Carotenoid dynamics in Atlantic salmon
Hannah Rajasingh, Leiv  yehaug, Dag Inge V ge, Stig W Omholt
BMC Biology 2006, 4:10 (18April2006)
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Research article
Human Lsg1 defines a family of essential GTPases that correlates with the evolution of compartmentalization
Emmanuel G Reynaud, Miguel A Andrade, Fabien Bonneau, Thi Bach Nga Ly, Michael Knop, Klaus Scheffzek, Rainer Pepperkok
BMC Biology 2005, 3:21 (7October2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications
The Rice Chromosomes 11 and 12 Sequencing Consortia*
BMC Biology 2005, 3:20 (27September2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Alternative pre-mRNA processing regulates cell-type specific expression of the IL4l1 and NUP62 genes
Stefan Wiemann, Anja Kolb-Kokocinski, Annemarie Poustka
BMC Biology 2005, 3:16 (19July2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Fuzzy species among recombinogenic bacteria
William P Hanage, Christophe Fraser, Brian G Spratt
BMC Biology 2005, 3:6 (7March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig
Frank Gr nlund Jrgensen, Asger Hobolth, Henrik Hornshj, Christian Bendixen, Merete Fredholm, Mikkel Heide Schierup
BMC Biology 2005, 3:2 (28January2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Search for computational modules in the C. elegans brain
Markus Reigl, Uri Alon, Dmitri B Chklovskii
BMC Biology 2004, 2:25 (2December2004)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
The planetary biology of cytochrome P450 aromatases
Eric A Gaucher, Logan G Graddy, Tang Li, Rosalia CM Simmen, Frank A Simmen, David R Schreiber, David A Liberles, Christine M Janis, Steven A Benner
BMC Biology 2004, 2:19 (17August2004)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology] [Cited on BioMed Central]
Research article
Inter-genomic displacement via lateral gene transfer of bacterial trp operons in an overall context of vertical genealogy
Gary Xie, Carol A Bonner, Jian Song, Nemat O Keyhani, Roy A Jensen
BMC Biology 2004, 2:15 (23June2004)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
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