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Predominant membrane localization is an essential feature of the bacterial signal recognition particle receptor
Miryana Mircheva, Diana Boy, Benjamin Weiche, Friederike Hucke, Peter Graumann, Hans-Georg Koch BMC Biology 2009, 7:76 (13 November 2009)
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Editor’s summary
Bacterial signal recognition particle receptor (FtsY) is almost exclusively membrane-bound in vivo and this localization is important for its role in cotranslational targeting, overturning previous indications that it functioned as a cytosolic protein.
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A genome-wide synthetic dosage lethality screen reveals multiple pathways that require the functioning of ubiquitin-binding proteins Rad23 and Dsk2
Chang Liu, Dewald van Dyk, Yue Li, Brenda Andrews, Hai Rao BMC Biology 2009, 7:75 (12 November 2009)
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Editor’s summary
An approach to identifying the physiological targets of ubiquitin receptors and the biological circuits they regulate is validated by screening for genes whose overexpression slows the growth of yeast cells lacking the ubiquitin-binding proteins Rad23 and Dsk2
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A remarkable diversity of bone-eating worms (Osedax; Siboglinidae; Annelida)
Robert C Vrijenhoek, Shannon B Johnson, Greg W Rouse BMC Biology 2009, 7:74 (10 November 2009)
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Editor’s summary
Twelve additional evolutionary lineages of Osedax worms significantly expand the known diversity of this genus of mouthless marine bone-eaters, and date the split from their siboglinid relatives to between 20 and 45 million years ago.
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Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
Jochen Trauner, Johannes Schinko, Marcé D Lorenzen, Teresa D Shippy, Ernst A Wimmer, Richard W Beeman, Martin Klingler, Gregor Bucher, Susan J Brown BMC Biology 2009, 7:73 (5 November 2009)
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Editor’s summary
A major genome-wide transposon mutagenesis screen in the red flour beetle sets the scene for future genetic analyses in this increasingly important model organism, and the same screening procedure can be potentially applied to other insects.
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Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities
Thorsten Stoeck, Anke Behnke, Richard Christen, Linda Amaral-Zettler, Maria J Rodriguez-Mora, Andrei Chistoserdov, William Orsi, Virginia P Edgcomb BMC Biology 2009, 7:72 (3 November 2009)
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Editor’s summary
High-throughput parallel tag sequencing combined with a novel bioinformatic pipeline detects a rich diversity of protists in two contrasting anoxic marine environments, finding many taxon groups missed by previous clone-based surveys.
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The scent of supercolonies: the discovery, synthesis and behavioural verification of ant colony recognition cues
Miriam Brandt, Ellen van Wilgenburg, Robert Sulc, Kenneth J Shea, Neil D Tsutsui BMC Biology 2009, 7:71 (28 October 2009)
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Editor’s summary
Specific cuticular hydrocarbons isolated from Argentine ants have been synthesised in pure form and shown to act as colony recognition cues, capable of triggering aggression in this supercolony-forming invasive species.
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Genetical genomic determinants of alcohol consumption in rats and humans
Boris Tabakoff, Laura Saba, Morton Printz, Pam Flodman, Colin Hodgkinson, David Goldman, George Koob, Heather N Richardson, Katerina Kechris, Richard L Bell, Norbert Hübner, Matthias Heinig, Michal Pravenec, Jonathan Mangion, Lucie Legault, Maurice Dongier, Katherine M Conigrave, John B Whitfield, John Saunders, Bridget Grant, Paula L Hoffman, WHO/ISBRA Study on State and Trait Markers of Alcoholism BMC Biology 2009, 7:70 (27 October 2009)
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Editor’s summary
Genetic pathways involving appetite, satiety and reward affect alcohol consumption in rats and humans, specifically GABAergic and dopaminergic signaling, but genes in these pathways are not linked to alcohol dependence or abuse in people.
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Evidence for the adaptation of protein pH-dependence to subcellular pH
Pedro Chan, Jim Warwicker BMC Biology 2009, 7:69 (22 October 2009)
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Editor’s summary
The pH at which proteins are predicted to be most stable relates to the location of their histidine residues, and the average for all proteins in a subcellular compartment correlates closely with local pH.
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TonB-dependent transporters and their occurrence in cyanobacteria
Oliver Mirus, Sascha Strauss, Kerstin Nicolaisen, Arndt von Haeseler, Enrico Schleiff BMC Biology 2009, 7:68 (12 October 2009)
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Editor’s summary
Cyanobacteria have atypical TonB-dependent iron transporters that depend on iron, copper or nitrogen for their expression.
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Retinoic acid enhances skeletal muscle progenitor formation and bypasses inhibition by bone morphogenetic protein 4 but not dominant negative β-catenin
Karen AM Kennedy, Tammy Porter, Virja Mehta, Scott D Ryan, Feodor Price, Vian Peshdary, Christina Karamboulas, Josée Savage, Thomas A Drysdale, Shun-Cheng Li, Steffany AL Bennett, Ilona S Skerjanc BMC Biology 2009, 7:67 (8 October 2009)
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Editor’s summary
Retinoic acid enhances skeletal myogenesis in stem cells by activating mesodermal and muscle progenitor genes and beta-catenin, and inhibits cardiomyogenesis by downregulating BMP4 signaling.
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Recombination and insertion events involving the botulinum neurotoxin complex genes in Clostridium botulinum types A, B, E and F and Clostridium butyricum type E strains
Karen K Hill, Gary Xie, Brian T Foley, Theresa J Smith, Amy C Munk, David Bruce, Leonard A Smith, Thomas S Brettin, John C Detter BMC Biology 2009, 7:66 (5 October 2009)
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Editor’s summary
Botulinum neurotoxin genes in Clostridium strains are found associated with insertion elements and recombinases, and show evidence of many recombination events, supporting the importance of horizontal gene transfer and recombination in pathogen evolution.
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Coordinated spatial and temporal expression of Hox genes during embryogenesis in the acoel Convolutriloba longifissura
Andreas Hejnol, Mark Q Martindale BMC Biology 2009, 7:65 (1 October 2009)
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Editor’s summary
Hox expression in an acoel, the probable sister group of bilaterians, suggests that the Hox genes of ancestral bilateral animals originally controlled anterior-posterior patterning of the nervous system before being co-opted to pattern other tissues.
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Dual control by a single gene of secondary sexual characters and mating preferences in medaka
Shoji Fukamachi, Masato Kinoshita, Kouichi Aizawa, Shoji Oda, Axel Meyer, Hiroshi Mitani BMC Biology 2009, 7:64 (29 September 2009)
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Editor’s summary
A somatolactin mutation in medaka fish that reduces orange pigmentation makes them unattractive to all medaka but those carrying the mutation, suggesting that a single mutation can trigger assortative mating leading to speciation.
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c-Myc affects mRNA translation, cell proliferation and progenitor cell function in the mammary gland
Tina Stoelzle, Patrick Schwarb, Andreas Trumpp, Nancy E Hynes BMC Biology 2009, 7:63 (28 September 2009)
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Editor’s summary
c-myc knockout mice have slower alveolar cell proliferation in the mammary gland during pregnancy and less efficient translation of mRNAs involved in milk production, showing c-Myc to be important for pregnancy and lactation in mice.
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scribble mutants promote aPKC and JNK-dependent epithelial neoplasia independently of Crumbs
Gregory R Leong, Karen R Goulding, Nancy Amin, Helena E Richardson, Anthony M Brumby BMC Biology 2009, 7:62 (24 September 2009)
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| F1000 Biology
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Editor’s summary
Scribble, a cell polarity regulator in Drosophila, represses tumorigenesis by inhibiting atypical protein kinase C and Jun N-terminal kinase-dependent pathways, and this might be relevant for how human Scrib restrains oncogene-mediated transformation.
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Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis
Alejandro Zúñiga, Christian Hödar, Patricia Hanna, Freddy Ibáñez, Pablo Moreno, Rodrigo Pulgar, Luis Pastenes, Mauricio González, Verónica Cambiazo BMC Biology 2009, 7:61 (22 September 2009)
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Editor’s summary
Many previously uncharacterized genes uncovered by a subtractive hybridization analysis of early Drosophila development are spatiotemporally regulated during embryogenesis, including genes encoding a set of secreted and transmembrane proteins.
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Genetic determinants of mate recognition in Brachionus manjavacas (Rotifera)
Terry W Snell, Tonya L Shearer, Hilary A Smith, Julia Kubanek, Kristin E Gribble, David B Mark Welch BMC Biology 2009, 7:60 (9 September 2009)
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Editor’s summary
The rotifer mate recognition pheromone gene has been isolated from female animals and has been shown to affect male mating behavior, which should prove valuable in studying the evolution and speciation of these tiny aquatic animals.
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Receptor oligomerization and beyond: a case study in bone morphogenetic proteins
Kai Heinecke, Axel Seher, Werner Schmitz, Thomas D Mueller, Walter Sebald, Joachim Nickel BMC Biology 2009, 7:59 (7 September 2009)
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Editor’s summary
At low concentrations, bone morphogenetic proteins can bind preformed receptors to give rapid transient signals, while at high concentrations, they bind single receptor chains then recruit others to generate sustained and diverse signals through different oligomeric complexes.
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Light-dependent roles of the G-protein α subunit GNA1 of Hypocrea jecorina (anamorph Trichoderma reesei)
Christian Seibel, Gabriela Gremel, Roberto do Nascimento Silva, André Schuster, Christian P Kubicek, Monika Schmoll BMC Biology 2009, 7:58 (3 September 2009)
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Editor’s summary
The G-protein signaling subunit GNA1 modulates growth of the fungus Trichoderma reesei, responding to environmental cues such as carbon source and light, and altering the regulation of cellulase expression.
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Phylogeographic analysis reveals association of tick-borne pathogen, Anaplasma marginale, MSP1a sequences with ecological traits affecting tick vector performance
Agustín Estrada-Peña, Victoria Naranjo, Karina Acevedo-Whitehouse, Atilio J Mangold, Katherine M Kocan, José de la Fuente BMC Biology 2009, 7:57 (1 September 2009)
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Editor’s summary
Sequence divergence of the major surface protein MSP1a of the intracellular bacterial parasite Anaplasma indicates different evolutionary pressures in different ecoregions, and a role for environmental factors that affect the tick vector.
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Golgi localisation of GMAP210 requires two distinct cis-membrane binding mechanisms
Jesus Cardenas, Sabrina Rivero, Bruno Goud, Michel Bornens, Rosa M Rios BMC Biology 2009, 7:56 (28 August 2009)
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The cis-Golgi protein GMAP210 maintains the integrity of Golgi ribbons by linking cisternal stacks, anchoring cisternae surfaces with its C-terminus and projecting its N-terminus to bind to neighboring cis-cisternae.
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δ-Opioid receptor activation attenuates oxidative injury in the ischemic rat brain
Yilin Yang, Xiwei Xia, Yi Zhang, Qiang Wang, Lu Li, Guanghua Luo, Ying Xia BMC Biology 2009, 7:55 (26 August 2009)
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Activating delta-opioid receptors in a rat model of stroke attenuates oxidative injury by increasing activation of antioxidants and decreasing levels of free radicals, which helps to explain the neuroprotective properties of these receptors.
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Antibiotic treatment leads to the elimination of Wolbachia endosymbionts and sterility in the diplodiploid collembolan Folsomia candida
Nathan Pike, Rachel Kingcombe BMC Biology 2009, 7:54 (24 August 2009)
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Antibiotic treatment that eliminates Wolbachia from the cells of its insect host Folsomia candida leads to total sterility of females, implying a role for this bacterial endosymbiont in the parthenogenetic reproduction of a diplodiploid species.
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Control of chicken CR1 retrotransposons is independent of Dicer-mediated RNA interference pathway
Sung-Hun Lee, Preethi Eldi, Soo-Young Cho, Danny Rangasamy BMC Biology 2009, 7:53 (19 August 2009)
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Editor’s summary
Chicken CR1 transposable elements remain largely silent in the absence of Dicer, unlike human LINE1 elements whose activity increases upon Dicer knockdown and a loss of RNAi-mediated control.
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Connexin channels and phospholipids: association and modulation
Darren Locke, Andrew L Harris BMC Biology 2009, 7:52 (17 August 2009)
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Editor’s summary
Specific endogenous anionic phospholipids tightly associate with two isoforms of connexin unpaired hemichannels and gap junction plaques, contributing to connexin channel activity by altering membrane charge and potentials.
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