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Volume 8 (2010) - July 2010

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Research article   Open Access

The Drosophila homolog of the mammalian imprint regulator, CTCF, maintains the maternal genomic imprint in Drosophila melanogaster

William A MacDonald, Debashish Menon, Nicholas J Bartlett, G Elizabeth Sperry, Vanya Rasheva, Victoria Meller, Vett K Lloyd BMC Biology 2010, 8:105 (30 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

In mammals, CTCF acts as an insulator to maintain parent-specific expression from an imprinted domain. McDonald and colleagues show that Drosophila does it the same way.

Commentary   Open Access

Insulators and imprinting from flies to mammals

Chunhui Hou, Victor G Corces BMC Biology 2010, 8:104 (30 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

CTCF is necessary for the maintenance of genetic imprinting in mammals. Hou and Corces comment on a report in BMC Biology on the evolutionary conservation of the mechanism in Drosophila.

Commentary   Open Access Highly Accessed

Vertebrate Hedgehog signaling: cilia rule

Christopher W Wilson, Didier YR Stainier BMC Biology 2010, 8:102 (29 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Recent work, including a study in BMC Biology, has shown that Hedgehog signaling through the primary cilium is conserved across the vertebrate phylum. Christopher Wilson and Didier Stainier comment.

Commentary   Open Access Highly Accessed

Losing the desire: selection can promote obligate asexuality

Kayla C King, Gregory DD Hurst BMC Biology 2010, 8:101 (28 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Hurst and King discuss how and why asexuality arises from sexual species in light of a new model proposed in BMC Evolutionary Biology in which the loss of sex in parasitoid wasps arises from infection with feminizing-symbionts.

Research article   Open Access Highly Accessed

How 5000 independent rowers coordinate their strokes in order to row into the sunlight: Phototaxis in the multicellular green alga Volvox

Noriko Ueki, Shigeru Matsunaga, Isao Inouye, Armin Hallmann BMC Biology 2010, 8:103 (27 July 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Hallmann and colleagues develop a model in the multicellular algae, Volvox, to predict how light orientation is achieved without any known direct intercellular communication; this mechanism indicates how multicellular organisms adapt the phototactic behavior of their unicellular ancestors.

Commentary   Open Access Highly Accessed

Mitochondrial dynamics: quantifying mitochondrial fusion in vitro

Alexis Jourdain, Jean-Claude Martinou BMC Biology 2010, 8:99 (26 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Jourdain and Martinou explain how a new technique reported in a recent BMC Biology paper for tracking mitochondrial fusion may help to identify therapeutic targets for associated neurodegenerative diseases.

Methodology article   Open Access

A novel cell-free mitochondrial fusion assay amenable for high-throughput screenings of fusion modulators

Astrid C Schauss, Huiyan Huang, Seok-Yong Choi, Liqun Xu, Sébastien Soubeyrand, Patricia Bilodeau, Rodolfo Zunino, Peter Rippstein, Michael A Frohman, Heidi M McBride BMC Biology 2010, 8:100 (26 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Mitochondria must occasionally fuse to maintain their integrity. McBride and colleagues describe the first assay to monitor the process in vitro and allow the identification of cytosolic factors and drugs modulating mitochondrial fusion.

Question and Answer   Open Access Highly Accessed

Q&A: Robotics as a tool to understand the brain

Daniel M Wolpert, J Randall Flanagan BMC Biology 2010, 8:92 (23 July 2010)

Full text | PDF | PubMed |  Editor’s summary

Wolpert and Flanagan outline in Q&A format how a robotically controlled virtual reality can be used to explore how the brain works.

Commentary   Open Access Highly Accessed

A question of scale: Human migrations writ large and small

Murray P Cox, Michael F Hammer BMC Biology 2010, 8:98 (21 July 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Gene flow analysis is helping to reconstruct the genetic origin of humans. Murray Cox and Michael Hammer present some recent advances in the field and discuss some of the limitations and challenges facing current and future researchers.

Commentary   Open Access Highly Accessed

Regulation of lipid droplet turnover by ubiquitin ligases

Philipp Alberts, Daniela Rotin BMC Biology 2010, 8:94 (19 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Spartin is one of several proteins mutated in various forms of spastic paraplegia. Alberts and Rotin discuss new research, including a recent report in BMC Biology, showing a role for Spartin in lipid droplet turnover via the recruitment of ubiquitin ligases.

Editorial   Open Access Highly Accessed

The evolution of gene regulation, the RNA universe, and the vexed questions of artefact and noise

Miranda Robertson BMC Biology 2010, 8:97 (16 July 2010)

Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Is there more to the evolution of complexity than regulatory circuits operated by proteins can explain? Miranda Robertson outlines some opposing views.

Question and Answer   Open Access Highly Accessed

Video Q&A: Non-coding RNAs and eukaryotic evolution - a personal view

John Mattick BMC Biology 2010, 8:67 (16 July 2010)

Full text | PDF | PubMed | Cited on BioMed Central | 1 comment |  Editor’s summary

In a Q&A with video option, John Mattick explains why he thinks the key to the evolution of complex organisms and cognition lies in non-coding RNA.

Commentary   Open Access

Genome-wide association studies in Plasmodium species

Bridget Penman, Caroline Buckee, Sunetra Gupta, Sean Nee BMC Biology 2010, 8:90 (13 July 2010)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Researchers have begun to use GWAS in Plasmodium, Gupta and colleagues discuss recent studies including one in BMC Genetics and how at present these studies produce more questions than answers but ultimately will provide important results.

Research article   Open Access Highly Accessed

Serious limitations of the QTL/Microarray approach for QTL gene discovery

Ricardo A Verdugo, Charles R Farber, Craig H Warden, Juan F Medrano BMC Biology 2010, 8:96 (12 July 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Commentary   Open Access Highly Accessed

The global dynamics of RNA stability orchestrates responses to cellular activation

Jack D Keene BMC Biology 2010, 8:95 (8 July 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Cellular mRNA levels depend on the rates of both transcription and mRNA decay. Jack Keene comments on recent research in BMC Genomics that explores the role of mRNA stability in the dynamics of gene expression.

Review   Open Access Highly Accessed

Assessing the human immune system through blood transcriptomics

Damien Chaussabel, Virginia Pascual, Jacques Banchereau BMC Biology 2010, 8:84 (1 July 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Chaussabel and colleagues review the contributions of blood transcriptomics to identifying therapeutically relevant signatures of autoimmune and infectious disease, and the challenges of developing this approach into a mainstream tool.


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