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Research article   Open Access

DOF-binding sites additively contribute to guard cell-specificity of AtMYB60 promoter

Eleonora Cominelli, Massimo Galbiati, Alessandra Albertini, Fabio Fornara, Lucio Conti, George Coupland, Chiara Tonelli BMC Plant Biology 2011, 11:162 (16 November 2011)

Abstract | Full text | PDF | PubMed

Methodology article   Open Access

Characterization of highly efficient heavy-ion mutagenesis in Arabidopsis thaliana

Yusuke Kazama, Tomonari Hirano, Hiroyuki Saito, Yang Liu, Sumie Ohbu, Yoriko Hayashi, Tomoko Abe BMC Plant Biology 2011, 11:161 (15 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

A pair of orthologs of a leucine-rich repeat receptor kinase-like disease resistance gene family regulates rice response to raised temperature

Haitao Zhang, Yinglong Cao, Jing Zhao, Xianghua Li, Jinghua Xiao, Shiping Wang BMC Plant Biology 2011, 11:160 (15 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Orthologs of the rice Xa3/Xa26 disease-resistance gene are transcriptionally induced at raised temperatures, leading to the formation of temperature-sensitive lesions, suggesting their involvement in rice temperature sensing rather than resistance to Xanthomonas sp. infection.

Research article   Open Access

Fortunella margarita Transcriptional Reprogramming Triggered by Xanthomonas citri subsp. citri

Abeer A Khalaf, Frederick G Gmitter, Ana Conesa, Joaquin Dopazo, Gloria A Moore BMC Plant Biology 2011, 11:159 (11 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Identification and analysis of phosphorylation status of proteins in dormant terminal buds of poplar

Chang-Cai Liu, Chang-Fu Liu, Hong-Xia Wang, Zhi-Ying Shen, Chuan-Ping Yang, Zhi-Gang Wei BMC Plant Biology 2011, 11:158 (11 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Conservation and loss of ribosomal RNA gene sites in diploid and polyploid Fragaria (Rosaceae)

Bo Liu, Thomas M Davis BMC Plant Biology 2011, 11:157 (10 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

High resolution melting analysis for the detection of EMS induced mutations in wheat SbeIIa genes

Ermelinda Botticella, Francesco Sestili, Antonio Hernandez-Lopez, Andrew Phillips, Domenico Lafiandra BMC Plant Biology 2011, 11:156 (10 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Loss-of-function mutations affecting a specific Glycine max R2R3 MYB transcription factor result in brown hilum and brown seed coats

Jason D Gillman, Ashley Tetlow, Jeong-Deong Lee, J Shannon, Kristin Bilyeu BMC Plant Biology 2011, 11:155 (9 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Chemical and transcriptional responses of Norway spruce genotypes with different susceptibility to Heterobasidion spp. infection

Marie Danielsson, Karl Lundén, Malin Elfstrand, Jiang Hu, Tao Zhao, Jenny Arnerup, Katarina Ihrmark, Gunilla Swedjemark, Anna-Karin Borg-Karlson, Jan Stenlid BMC Plant Biology 2011, 11:154 (8 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

A 48 SNP set for grapevine cultivar identification

José A Cabezas, Javier Ibáñez, Diego Lijavetzky, Dolores Vélez, Gema Bravo, Virginia Rodríguez, Iván Carreño, Angelica M Jermakow, Juan Carreño, Leonor Ruiz-García, Mark R Thomas, José M Martinez-Zapater BMC Plant Biology 2011, 11:153 (8 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Genetic variation of γ-tocopherol methyltransferase gene contributes to elevated α-tocopherol content in soybean seeds

Maria S Dwiyanti, Tetsuya Yamada, Masako Sato, Jun Abe, Keisuke Kitamura BMC Plant Biology 2011, 11:152 (7 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

A highly conserved NB-LRR encoding gene cluster effective against Setosphaeria turcica in sorghum

Tom Martin, Moses Biruma, Ingela Fridborg, Patrick Okori, Christina Dixelius BMC Plant Biology 2011, 11:151 (3 November 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Whole-Organ analysis of calcium behaviour in the developing pistil of olive (Olea europaea L.) as a tool for the determination of key events in sexual plant reproduction

Krzysztof Zienkiewicz, Juan D Rejón, Cynthia Suárez, Antonio J Castro, Juan de Dios Alché, María Rodríguez García BMC Plant Biology 2011, 11:150 (3 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Transcript and metabolite analysis in Trincadeira cultivar reveals novel information regarding the dynamics of grape ripening

Ana M Fortes, Patricia Agudelo-Romero, Marta S Silva, Kashif Ali, Lisete Sousa, Federica Maltese, Young H Choi, Jerome Grimplet, José M Martinez- Zapater, Robert Verpoorte, Maria S Pais BMC Plant Biology 2011, 11:149 (2 November 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article   Open Access

Multiallelic epistatic model for an out-bred cross and mapping algorithm of interactive quantitative trait loci

Chunfa Tong, Bo Zhang, Zhong Wang, Meng Xu, Xiaoming Pang, Jingna Si, Minren Huang, Rongling Wu BMC Plant Biology 2011, 11:148 (31 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum)

Joanne R Russell, Micha Bayer, Clare Booth, Linda Cardle, Christine A Hackett, Pete E Hedley, Linzi Jorgensen, Jenny A Morris, Rex M Brennan BMC Plant Biology 2011, 11:147 (28 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Association analysis of frost tolerance in rye using candidate genes and phenotypic data from controlled, semi-controlled, and field phenotyping platforms

Yongle Li, Andreas Böck, Grit Haseneyer, Viktor Korzun, Peer Wilde, Chris-Carolin Schön, Donna P Ankerst, Eva Bauer BMC Plant Biology 2011, 11:146 (27 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Transcript profiling reveals expression differences in wild-type and glabrous soybean lines

Matt Hunt, Navneet Kaur, Martina Stromvik, Lila Vodkin BMC Plant Biology 2011, 11:145 (26 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Identification and characterization of the Non-race specific Disease Resistance 1 (NDR1) orthologous protein in coffee

Jean-Luc Cacas, Anne-Sophie Petitot, Louis Bernier, Joan Estevan, Geneviève Conejero, Sébastien Mongrand, Diana Fernandez BMC Plant Biology 2011, 11:144 (24 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Parthenocarpic potential in Capsicum annuum L. is enhanced by carpelloid structures and controlled by a single recessive gene

Aparna Tiwari, Adam Vivian-Smith, Roeland E Voorrips, Myckel EJ Habets, Lin B Xue, Remko Offringa, Ep Heuvelink BMC Plant Biology 2011, 11:143 (21 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

The grapevine guard cell-related VvMYB60 transcription factor is involved in the regulation of stomatal activity and is differentially expressed in response to ABA and osmotic stress

Massimo Galbiati, José Matus, Priscilla Francia, Fabio Rusconi, Paola Cañón, Consuelo Medina, Lucio Conti, Eleonora Cominelli, Chiara Tonelli, Patricio Arce-Johnson BMC Plant Biology 2011, 11:142 (21 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Identification of novel maize miRNAs by measuring the precision of precursor processing

Yinping Jiao, Weibin Song, Mei Zhang, Jinsheng Lai BMC Plant Biology 2011, 11:141 (20 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Localization of QTLs for in vitro plant regeneration in tomato

Carlos Trujillo-Moya, Carmina Gisbert, Santiago Vilanova, Fernando Nuez BMC Plant Biology 2011, 11:140 (20 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Characterization and development of EST-derived SSR markers in cultivated sweetpotato (Ipomoea batatas)

Zhangying Wang, Jun Li, Zhongxia Luo, Lifei Huang, Xinliang Chen, Boping Fang, Yujun Li, Jingyi Chen, Xiongjian Zhang BMC Plant Biology 2011, 11:139 (20 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Transcriptomics of shading-induced and NAA-induced abscission in apple (Malus domestica) reveals a shared pathway involving reduced photosynthesis, alterations in carbohydrate transport and signaling and hormone crosstalk

Hong Zhu, Chris D Dardick, Eric P Beers, Ann M Callanhan, Rui Xia, Rongcai Yuan BMC Plant Biology 2011, 11:138 (17 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Is the basal area of maize internodes involved in borer resistance?

Rogelio Santiago, Ana Butrón, Pedro Revilla, Rosa Malvar BMC Plant Biology 2011, 11:137 (14 October 2011)

Abstract | Full text | PDF | PubMed

Database   Open Access Highly Accessed

BRAD, the genetics and genomics database for Brassica plants

Feng Cheng, Shengyi Liu, Jian Wu, Lu Fang, Silong Sun, Bo Liu, Pingxia Li, Wei Hua, Xiaowu Wang BMC Plant Biology 2011, 11:136 (13 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Identification and analysis of common bean (Phaseolus vulgaris L.) transcriptomes by massively parallel pyrosequencing

Venu Kalavacharla, Zhanji Liu, Blake C Meyers, Jyothi Thimmapuram, Kalpalatha Melmaiee BMC Plant Biology 2011, 11:135 (11 October 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Nodulin 41, a novel late nodulin of common bean with peptidase activity

Juan Olivares, Claudia Díaz-Camino, Georgina Estrada-Navarrete, Xochitl Alvarado-Affantranger, Margarita Rodríguez-Kessler, Fernando Z Zamudio, Timoteo Olamendi-Portugal, Yamile Márquez, Luis Servín, Federico Sánchez BMC Plant Biology 2011, 11:134 (10 October 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Tic20 forms a channel independent of Tic110 in chloroplasts

Erika Kovács-Bogdán, J Philipp Benz, Jürgen Soll, Bettina Bölter BMC Plant Biology 2011, 11:133 (30 September 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Mapping QTLs for oil traits and eQTLs for oleosin genes in jatropha

Peng Liu, Chun Wang, Lei Li, Fei Sun, Peng Liu, Gen Yue BMC Plant Biology 2011, 11:132 (29 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.)

Grit Haseneyer, Thomas Schmutzer, Michael Seidel, Ruonan Zhou, Martin Mascher, Chris-Carolin Schön, Stefan Taudien, Uwe Scholz, Nils Stein, Klaus FX Mayer, Eva Bauer BMC Plant Biology 2011, 11:131 (28 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Role of TRIPTYCHON in trichome patterning in Arabidopsis

Martina Pesch, Martin Hülskamp BMC Plant Biology 2011, 11:130 (27 September 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

The NAC domain-containing protein, GmNAC6, is a downstream component of the ER stress- and osmotic stress-induced NRP-mediated cell-death signaling pathway

Jerusa AQA Faria, Pedro AB Reis, Marco TB Reis, Gustavo L Rosado, Guilherme L Pinheiro, Giselle C Mendes, Elizabeth PB Fontes BMC Plant Biology 2011, 11:129 (26 September 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Glycine max NAC6 (GmNAC6), a NAC domain-containing protein from soybean, requires both endoplasmic reticulum- and osmotic-stress for full activation and may act downstream of the N-rich proteins in the cell death signaling pathway.

Research article   Open Access

Transcriptional analysis of cell growth and morphogenesis in the unicellular green alga Micrasterias (Streptophyta), with emphasis on the role of expansin

Katrijn Vannerum, Marie JJ Huysman, Riet De Rycke, Marnik Vuylsteke, Frederik Leliaert, Jacob Pollier, Ursula Lütz-Meindl, Jeroen Gillard, Lieven De Veylder, Alain Goossens, Dirk Inzé, Wim Vyverman BMC Plant Biology 2011, 11:128 (25 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

Blanca E Barrera-Figueroa, Lei Gao, Ndeye N Diop, Zhigang Wu, Jeffrey D Ehlers, Philip A Roberts, Timothy J Close, Jian-Kang Zhu, Renyi Liu BMC Plant Biology 2011, 11:127 (17 September 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Dynamic distribution patterns of ribosomal DNA and chromosomal evolution in Paphiopedilum, a lady's slipper orchid

Tianying Lan, Victor A Albert BMC Plant Biology 2011, 11:126 (12 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Lady's slipper orchids, Paphiopedilum spp, display many chromosomal rearrangements but only weak concerted evolutionary forces among highly duplicated 5S rDNA arrays suggesting that double-strand break repair processes are dynamic and ongoing

Research article   Open Access

Localization of DIR1 at the tissue, cellular and subcellular levels during Systemic Acquired Resistance in Arabidopsis using DIR1:GUS and DIR1:EGFP reporters

Marc J Champigny, Heather Shearer, Asif Mohammad, Karen Haines, Melody Neumann, Roger Thilmony, Sheng He, Pierre Fobert, Nancy Dengler, Robin K Cameron BMC Plant Biology 2011, 11:125 (6 September 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection

Imke Lang, Ladislav Hodac, Thomas Friedl, Ivo Feussner BMC Plant Biology 2011, 11:124 (6 September 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Over-expressing the C3 photosynthesis cycle enzyme Sedoheptulose-1-7 Bisphosphatase improves photosynthetic carbon gain and yield under fully open air CO2 fumigation (FACE)

David M Rosenthal, Anna M Locke, Mahdi Khozaei, Christine A Raines, Stephen P Long, Donald R Ort BMC Plant Biology 2011, 11:123 (31 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Characterization of a caleosin expressed during olive (Olea europaea L.) pollen ontogeny

Krzysztof Zienkiewicz, Agnieszka Zienkiewicz, María Rodríguez-García, Antonio J Castro BMC Plant Biology 2011, 11:122 (31 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Citramalic acid and salicylic acid in sugar beet root exudates solubilize soil phosphorus

Reza Khorassani, Ursula Hettwer, Astrid Ratzinger, Bernd Steingrobe, Petr Karlovsky, Norbert Claassen BMC Plant Biology 2011, 11:121 (26 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Global transcriptome analysis of two ameiotic1 alleles in maize anthers: defining steps in meiotic entry and progression through prophase I

Guo-Ling Nan, Arnaud Ronceret, Rachel C Wang, John F Fernandes, W Zacheus Cande, Virginia Walbot BMC Plant Biology 2011, 11:120 (26 August 2011)

Abstract | Full text | PDF | PubMed | 1 comment

Research article   Open Access Highly Accessed

The glutamine synthetase gene family in Populus

Vanessa Castro-Rodríguez, Angel García-Gutiérrez, Javier Canales, Concepción Avila, Edward G Kirby, Francisco M Cánovas BMC Plant Biology 2011, 11:119 (25 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

The ACR11 encodes a novel type of chloroplastic ACT domain repeat protein that is coordinately expressed with GLN2 in Arabidopsis

Tzu-Ying Sung, Tsui-Yun Chung, Chih-Ping Hsu, Ming-Hsiun Hsieh BMC Plant Biology 2011, 11:118 (24 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

A single amino acid change within the R2 domain of the VvMYB5b transcription factor modulates affinity for protein partners and target promoters selectivity

Imène Hichri, Laurent Deluc, François Barrieu, Jochen Bogs, Ali Mahjoub, Farid Regad, Bernard Gallois, Thierry Granier, Claudine Trossat-Magnin, Eric Gomès, Virginie Lauvergeat BMC Plant Biology 2011, 11:117 (23 August 2011)

Abstract | Full text | PDF | PubMed

Database   Open Access Highly Accessed

SolRgene: an online database to explore disease resistance genes in tuber-bearing Solanum species

Vivianne GAA Vleeshouwers, Richard Finkers, Dirk Budding, Marcel Visser, Mirjam MJ Jacobs, Ralph van Berloo, Mathieu Pel, Nicolas Champouret, Erin Bakker, Pavel Krenek, Hendrik Rietman, DirkJan Huigen, Roel Hoekstra, Aska Goverse, Ben Vosman, Evert Jacobsen, Richard GF Visser BMC Plant Biology 2011, 11:116 (18 August 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Induction of stromule formation by extracellular sucrose and glucose in epidermal leaf tissue of Arabidopsis thaliana

Martin Schattat, Ralf Klösgen BMC Plant Biology 2011, 11:115 (16 August 2011)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Resistance to Plasmopara viticola in a grapevine segregating population is associated with stilbenoid accumulation and with specific host transcriptional responses

Giulia Malacarne, Urska Vrhovsek, Luca Zulini, Alessandro Cestaro, Marco Stefanini, Fulvio Mattivi, Massimo Delledonne, Riccardo Velasco, Claudio Moser BMC Plant Biology 2011, 11:114 (12 August 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds

Peter C McKeown, Sylvia Laouielle-Duprat, Pjotr Prins, Philip Wolff, Marc W Schmid, Mark TA Donoghue, Antoine Fort, Dorota Duszynska, Aurélie Comte, Nga Lao, Trevor J Wennblom, Geert Smant, Claudia Köhler, Ueli Grossniklaus, Charles Spillane BMC Plant Biology 2011, 11:113 (12 August 2011)

Abstract | Full text | PDF | PubMed

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