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1.
Comparative transcriptome analysis and marker development of two closely related Primrose species (Primula poissonii and Primula wilsonii )
Lu Zhang, Hai-Fei Yan, Wei Wu, Hui Yu, Xue-Jun Ge BMC Genomics 2013, 14 :329 (14 May 2013)
Abstract | Full text | PDF | PubMed
2.
Optimizing de novo assembly of short-read RNA-seq data for phylogenomics
Ya Yang, Stephen A Smith BMC Genomics 2013, 14 :328 (14 May 2013)
Abstract | Provisional PDF
| PubMed
3.
Characterization of human plasma-derived exosomal RNAs by deep sequencing
Xiaoyi Huang, Tiezheng Yuan, Michael Tschannen, Zhifu Sun, Howard Jacob, Meijun Du, Meihua Liang, Rachel L Dittmar, Yong Liu, Mingyu Liang, Manish Kohli, Stephen N Thibodeau, Lisa Boardman, Liang Wang BMC Genomics 2013, 14 :319 (10 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
4.
Discovering chromatin motifs using FAIRE sequencing and the human diploid genome
Chia-Chun Yang, Michael J Buck, Min-Hsuan Chen, Yun-Fan Chen, Hsin-Chi Lan, Jeremy JW Chen, Chao Cheng, Chun-Chi Liu BMC Genomics 2013, 14 :310 (8 May 2013)
Abstract | Full text | PDF | PubMed
5.
Transcriptome-wide comparison of sequence variation in divergent ecotypes of kokanee salmon
Matthew A Lemay, David J Donnelly, Michael A Russello BMC Genomics 2013, 14 :308 (7 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
6.
Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing
Anis Djari, Diane Esquerré, Bernard Weiss, Frédéric Martins, Cédric Meersseman, Mekki Boussaha, Christophe Klopp, Dominique Rocha BMC Genomics 2013, 14 :307 (7 May 2013)
Abstract | Provisional PDF
| PubMed
7.
Functional transcriptomic analysis of the role of MAB-5/Hox in Q neuroblast migration in Caenorhabditis elegans
Joel V Tamayo, Mahekta Gujar, Stuart J Macdonald, Erik A Lundquist BMC Genomics 2013, 14 :304 (4 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
8.
5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction
Joseph M Dhahbi, Stephen R Spindler, Hani Atamna, Amy Yamakawa, Dario Boffelli, Patricia Mote, David IK Martin BMC Genomics 2013, 14 :298 (2 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
9.
Summary of talks and papers at ISCB-Asia/SCCG 2012
Konstantin Tretyakov, Tatyana Goldberg, Victor X Jin, Paul Horton BMC Genomics 2013, 14 (Suppl 2):I1 (29 April 2013)
Abstract | Full text | PDF | ePUB
10.
Unscrambling butterfly oogenesis
Jean-Michel Carter, Simon C Baker, Ryan Pink, David RF Carter, Aiden Collins, Jeremie Tomlin, Melanie Gibbs, Casper J Breuker BMC Genomics 2013, 14 :283 (26 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
11.
Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development
Jianxia Zhang, Kunlin Wu, Songjun Zeng, Jaime A Teixeira da Silva, Xiaolan Zhao, Chang-En Tian, Haoqiang Xia, Jun Duan BMC Genomics 2013, 14 :279 (24 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
12.
Six novel Y chromosome genes in Anopheles mosquitoes discovered by independently sequencing males and females
Andrew Brantley Hall, Yumin Qi, Vladimir Timoshevskiy, Maria V Sharakhova, Igor V Sharakhov, Zhijian Tu BMC Genomics 2013, 14 :273 (23 April 2013)
Abstract | Full text | PDF | PubMed
13.
Transcriptional pathways associated with the slow growth phenotype of transformed Anaplasma marginale
Sebastián Aguilar Pierlé, Gena Kenitra Hammac, Guy H Palmer, Kelly A Brayton BMC Genomics 2013, 14 :272 (22 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
14.
Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors
Dario Cantu, Vanesa Segovia, Daniel MacLean, Rosemary Bayles, Xianming Chen, Sophien Kamoun, Jorge Dubcovsky, Diane GO Saunders, Cristobal Uauy BMC Genomics 2013, 14 :270 (22 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
15.
Dynamic recruitment of microRNAs to their mRNA targets in the regenerating liver
Jonathan Schug, Lindsay B McKenna, Gabriel Walton, Nicholas Hand, Sarmistha Mukherjee, Kow Essuman, Zhongjie Shi, Yan Gao, Karen Markley, Momo Nakagawa, Vasumathi Kameswaran, Anastassios Vourekas, Joshua R Friedman, Klaus H Kaestner, Linda E Greenbaum BMC Genomics 2013, 14 :264 (18 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
16.
Transcriptome characterisation of Pinus tabuliformis and evolution of genes in the Pinus phylogeny
Shi-Hui Niu, Zhe-Xin Li, Hu-Wei Yuan, Xiao-Yang Chen, Yue Li, Wei Li BMC Genomics 2013, 14 :263 (18 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
17.
Long-range transcriptional regulation by the p110 CUX1 homeodomain protein on the
ENCODE array
Charles Vadnais, Arif A Awan, Ryoko Harada, Pier-Luc Clermont, Lam Leduy, Ginette Bérubé, Alain Nepveu BMC Genomics 2013, 14 :258 (16 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
18.
A zebrafish high throughput screening system used for Staphylococcus epidermidis infection marker discovery
Wouter J Veneman, Oliver W Stockhammer, Leonie de Boer, Sebastian A J Zaat, Annemarie H Meijer, Herman P Spaink BMC Genomics 2013, 14 :255 (15 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
19.
Non-canonical protein-DNA interactions identified by ChIP are not artifacts
Richard P Bonocora, Devon M Fitzgerald, Anne M Stringer, Joseph T Wade BMC Genomics 2013, 14 :254 (15 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
20.
Conserved expression of natural antisense transcripts in mammals
Maurice HT Ling, Yuguang Ban, Hongxiu Wen, San Ming Wang, Steven X Ge BMC Genomics 2013, 14 :243 (12 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
21.
Transcriptional landscape of Aspergillus niger at breaking of conidial dormancy revealed by RNA-sequencing
Michaela Novodvorska, Kimran Hayer, Steven T Pullan, Raymond Wilson, Martin J Blythe, Hein Stam, Malcolm Stratford, David B Archer BMC Genomics 2013, 14 :246 (11 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
22.
Molecular cloning of doublesex genes of four cladocera (water flea) species
Kenji Toyota, Yasuhiko Kato, Masaru Sato, Naomi Sugiura, Shinichi Miyagawa, Hitoshi Miyakawa, Hajime Watanabe, Shigeto Oda, Yukiko Ogino, Chizue Hiruta, Takeshi Mizutani, Norihisa Tatarazako, Susanne Paland, Craig Jackson, John K Colbourne, Taisen Iguchi BMC Genomics 2013, 14 :239 (10 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
23.
High throughput transcriptome analysis of lipid metabolism in Syrian hamster liver in absence of an annotated genome
Roland Schmucki, Marco Berrera, Erich Küng, Serene Lee, Wolfgang E Thasler, Sabine Grüner, Martin Ebeling, Ulrich Certa BMC Genomics 2013, 14 :237 (10 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
24.
Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing
Saneyoshi Ueno, Christophe Klopp, Jean Charles Leplé, Jérémy Derory, Céline Noirot, Valérie Léger, Elodie Prince, Antoine Kremer, Christophe Plomion, Grégoire Le Provost BMC Genomics 2013, 14 :236 (10 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
25.
Integrated “omics” profiling indicates that miRNAs are modulators of the ontogenetic venom composition shift in the Central American rattlesnake, Crotalus simus simus
Jordi Durban, Alicia Pérez, Libia Sanz, Aarón Gómez, Fabián Bonilla, Santos Rodríguez, Danilo Chacón, Mahmood Sasa, Yamileth Angulo, José M Gutiérrez, Juan J Calvete BMC Genomics 2013, 14 :234 (10 April 2013)
Abstract | Full text | PDF | PubMed