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Research article   Open Access Highly Accessed

Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra

Claire T O¿Quin, Alexi C Drilea, Matthew A Conte, Thomas D Kocher BMC Genomics 2013, 14:287 (27 April 2013)

Abstract | Provisional PDF | PubMed

Research article   Open Access Highly Accessed

The Nocardia cyriacigeorgica GUH-2 genome shows ongoing adaptation of an environmental Actinobacteria to a pathogen's lifestyle

Anthony Zoropogui, Petar Pujic, Philippe Normand, Valérie Barbe, Patrick Belli, Arnault Graindorge, David Roche, David Vallenet, Sophie Mangenot, Patrick Boiron, Véronica Rodriguez-Nava, Sebastien Ribun, Yves Richard, Benoit Cournoyer, Didier Blaha BMC Genomics 2013, 14:286 (27 April 2013)

Abstract | Provisional PDF | PubMed

Research article   Open Access

Acid shock of Listeria monocytogenes at low environmental temperatures induces prfA, epithelial cell invasion, and lethality towards Caenorhabditis elegans

Klaus Neuhaus, Peter Satorhelyi, Kristina Schauer, Siegfried Scherer, Thilo M Fuchs BMC Genomics 2013, 14:285 (27 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Global remodeling of nucleosome positions in C. elegans

George Locke, Devorah Haberman, Steven M Johnson, Alexandre V Morozov BMC Genomics 2013, 14:284 (26 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Unscrambling butterfly oogenesis

Jean-Michel Carter, Simon C Baker, Ryan Pink, David RF Carter, Aiden Collins, Jeremie Tomlin, Melanie Gibbs, Casper J Breuker BMC Genomics 2013, 14:283 (26 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Gene expression patterns following unilateral traumatic brain injury reveals a local pro-inflammatory and remote anti-inflammatory response

Todd E White, Gregory D Ford, Monique C Surles-Zeigler, Alicia S Gates, Michelle C LaPlaca, Byron D Ford BMC Genomics 2013, 14:282 (25 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

Genome-wide association study of sleep in Drosophila melanogaster

Susan T Harbison, Lenovia J McCoy, Trudy FC Mackay BMC Genomics 2013, 14:281 (25 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Prediction and identification of natural antisense transcripts and their small RNAs in soybean (Glycine max)

Hu Zheng, Jiang Qiyan, Ni Zhiyong, Zhang Hui BMC Genomics 2013, 14:280 (24 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development

Jianxia Zhang, Kunlin Wu, Songjun Zeng, Jaime A Teixeira da Silva, Xiaolan Zhao, Chang-En Tian, Haoqiang Xia, Jun Duan BMC Genomics 2013, 14:279 (24 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

Gene promoters show chromosome-specificity and reveal chromosome territories in humans

Paul Gagniuc, Constantin Ionescu-Tirgoviste BMC Genomics 2013, 14:278 (24 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits

Harsh Raman, Rosy Raman, Andrzej Kilian, Frank Detering, Yan Long, David Edwards, Isobel AP Parkin, Andrew G Sharpe, Matthew N Nelson, Nick Larkan, Jun Zou, Jinling Meng, M Naveed Aslam, Jacqueline Batley, Wallace A Cowling, Derek Lydiate BMC Genomics 2013, 14:277 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Screening of differentially expressed genes in the growth plate of broiler chickens with Tibial Dyschondroplasia by microarray analysis

Wen-xia Tian, Jia-kui Li, Ping Qin, Rui Wang, Guan-bao Ning, Jian-gang Qiao, Hong-quan Li, Ding-ren Bi, Si-yi Pan, Ding-zong Guo BMC Genomics 2013, 14:276 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Genomic meta-analysis of growth factor and integrin pathways in chronic kidney transplant injury

Amrita Dosanjh, Elizabeth Robison, Tony Mondala, Steven R Head, Daniel R Salomon, Sunil M Kurian BMC Genomics 2013, 14:275 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi

Zhongtao Zhao, Huiquan Liu, Chenfang Wang, Jin-Rong Xu BMC Genomics 2013, 14:274 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Six novel Y chromosome genes in Anopheles mosquitoes discovered by independently sequencing males and females

Andrew Brantley Hall, Yumin Qi, Vladimir Timoshevskiy, Maria V Sharakhova, Igor V Sharakhov, Zhijian Tu BMC Genomics 2013, 14:273 (23 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Transcriptional pathways associated with the slow growth phenotype of transformed Anaplasma marginale

Sebastián Aguilar Pierlé, Gena Kenitra Hammac, Guy H Palmer, Kelly A Brayton BMC Genomics 2013, 14:272 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

Comparative genomic analysis of four representative plant growth-promoting rhizobacteria in Pseudomonas

Xuemei Shen, Hongbo Hu, Huasong Peng, Wei Wang, Xuehong Zhang BMC Genomics 2013, 14:271 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access Highly Accessed

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors

Dario Cantu, Vanesa Segovia, Daniel MacLean, Rosemary Bayles, Xianming Chen, Sophien Kamoun, Jorge Dubcovsky, Diane GO Saunders, Cristobal Uauy BMC Genomics 2013, 14:270 (22 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Software   Open Access

P2RP: a web-based framework for the identification and analysis of regulatory proteins in prokaryotic genomes

Mohamed Barakat, Philippe Ortet, David E Whitworth BMC Genomics 2013, 14:269 (20 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Translational signatures and mRNA levels are highly correlated in human stably expressed genes

Sergio R P Line, Xiaoming Liu, Ana de Souza, Fuli Yu BMC Genomics 2013, 14:268 (19 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Analysis of the spatial and temporal arrangement of transcripts over intergenic regions in the human malarial parasite Plasmodium falciparum

Karen Russell, Sandra Hasenkamp, Richard Emes, Paul Horrocks BMC Genomics 2013, 14:267 (19 April 2013)

Abstract | Full text | PDF | PubMed

Research article   Open Access

Characterization of differential transcript abundance through time during Nematostella vectensis development

Rebecca Helm, Stefan Siebert, Sarah Tulin, Joel Smith, Casey Dunn BMC Genomics 2013, 14:266 (19 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Methodology article   Open Access Highly Accessed

Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes

Petr Dmitriev, Ana Barat, Anna Polesskaya, Mary J O’Connell, Thomas Robert, Philippe Dessen, Thomas A Walsh, Vladimir Lazar, Ahmed Turki, Gilles Carnac, Dalila Laoudj-Chenivesse, Marc Lipinski, Yegor S Vassetzky BMC Genomics 2013, 14:265 (18 April 2013)

Abstract | Full text | PDF | PubMed

Research article   Open Access Highly Accessed

Dynamic recruitment of microRNAs to their mRNA targets in the regenerating liver

Jonathan Schug, Lindsay B McKenna, Gabriel Walton, Nicholas Hand, Sarmistha Mukherjee, Kow Essuman, Zhongjie Shi, Yan Gao, Karen Markley, Momo Nakagawa, Vasumathi Kameswaran, Anastassios Vourekas, Joshua R Friedman, Klaus H Kaestner, Linda E Greenbaum BMC Genomics 2013, 14:264 (18 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

Research article   Open Access

Transcriptome characterisation of Pinus tabuliformis and evolution of genes in the Pinus phylogeny

Shi-Hui Niu, Zhe-Xin Li, Hu-Wei Yuan, Xiao-Yang Chen, Yue Li, Wei Li BMC Genomics 2013, 14:263 (18 April 2013)

Abstract | Full text | PDF | ePUB | PubMed

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