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		Research article A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation Glenn T Howe, Jianbin Yu, Brian Knaus, Richard Cronn, Scott Kolpak, Peter Dolan, W Walter Lorenz, Jeffrey FD Dean BMC Genomics 2013, 14:137 (28 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article A Drosophila functional evaluation of candidates from human genome-wide association studies of type 2 diabetes and related metabolic traits identifies tissue-specific roles for dHHEX Jay Pendse, Prasanna V Ramachandran, Jianbo Na, Narisu Narisu, Jill L Fink, Ross L Cagan, Francis S Collins, Thomas J Baranski BMC Genomics 2013, 14:136 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum Amanda K Gibson, Zach Smith, Clay Fuqua, Keith Clay, John K Colbourne BMC Genomics 2013, 14:135 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Horizontal transfer of OC1 transposons in the Tasmanian devil Clement Gilbert, Paul Waters, Cedric Feschotte, Sarah Schaack BMC Genomics 2013, 14:134 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Pathway-focused bioassays and transcriptome analysis contribute to a better activity monitoring of complex herbal remedies Angela Klein, Oliver A Wrulich, Marcel Jenny, Peter Gruber, Kathrin Becker, Dietmar Fuchs, Johanna M Gostner, Florian Überall BMC Genomics 2013, 14:133 (27 February 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article Accurate indel prediction using paired-end short reads Dominik Grimm, Jörg Hagmann, Daniel Koenig, Detlef Weigel, Karsten Borgwardt BMC Genomics 2013, 14:132 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide detection of copy number variations using high-density SNP genotyping platforms in Holsteins Li Jiang, Jicai Jiang, Jie Yang, Xuan Liu, Jiying Wang, Haifei Wang, Xiangdong Ding, Jianfeng Liu, Qin Zhang BMC Genomics 2013, 14:131 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Identification and functional analysis of cytochrome P450 complement in Streptomyces virginiae IBL14 Zhi-Zhen Li, Xiao-Fei Li, Wei Yang, Xiang Dong, Jie Yu, Shu-Liang Zhu, Man Li, Li Xie, Wang-Yu Tong BMC Genomics 2013, 14:130 (27 February 2013) Abstract \| Full text \| PDF \| PubMed
		Database Neurocarta: aggregating and sharing disease-gene relations for the neurosciences Elodie Portales-Casamar, Carolyn Ch’ng, Frances Lui, Nicolas St-Georges, Anton Zoubarev, Artemis Y Lai, Mark Lee, Cathy Kwok, Willie Kwok, Luchia Tseng, Paul Pavlidis BMC Genomics 2013, 14:129 (26 February 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article A Poisson hierarchical modelling approach to detecting copy number variation in sequence coverage data Nuno Sepúlveda, Susana G Campino, Samuel A Assefa, Colin J Sutherland, Arnab Pain5, Taane G Clark BMC Genomics 2013, 14:128 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic analysis of the Trichuris muris-induced model of colitis reveals QTL overlap and a novel gene cluster for establishing colonic inflammation Scott E Levison, Paul Fisher, Jenny Hankinson, Leo Zeef, Steve Eyre, William E Ollier, John T McLaughlin, Andy Brass, Richard K Grencis, Joanne L Pennock BMC Genomics 2013, 14:127 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Global analysis of transcriptional regulators in Staphylococcus aureus Jose Antonio Ibarra, Ernesto Pérez-Rueda, Ronan K Carroll, Lindsey N Shaw BMC Genomics 2013, 14:126 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article De novo assembly and characterization of transcriptome using Illumina paired-end sequencing and identification of CesA gene in ramie (Boehmeria nivea L. Gaud) Touming Liu, Siyuan Zhu, Qingming Tang, Ping Chen, Yongting Yu, Shouwei Tang BMC Genomics 2013, 14:125 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Massive screening of copy number population-scale variation in Bos taurus genome Francesco Cicconardi, Giovanni Chillemi, Anna Tramontano, Cinzia Marchitelli, Alessio Valentini, Paolo Ajmone-Marsan, Alessandro Nardone BMC Genomics 2013, 14:124 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Comparative transcriptomics of early dipteran development Eva Jiménez-Guri, Jaime Huerta-Cepas, Luca Cozzuto, Karl R Wotton, Hui Kang, Heinz Himmelbauer, Guglielmo Roma, Toni Gabaldón, Johannes Jaeger BMC Genomics 2013, 14:123 (24 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Comparative genomics using teleost fish helps to systematically identify target gene bodies of functionally defined human enhancers Nazia Parveen, Ayesha Masood, Nouman Iftikhar, Bushra F Minhas, Rashid Minhas, Uzma Nawaz, Amir Ali Abbasi BMC Genomics 2013, 14:122 (23 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism Lea Atanasova, Stephane Le Crom, Sabine Gruber, Fanny Coulpier, Verena Seidl-Seiboth, Christian P Kubicek, Irina S Druzhinina BMC Genomics 2013, 14:121 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L Régine Delourme, Cyril Falentin, Berline Fomeju, Marie Boillot, Gilles Lassalle, Isabelle André, Jorge Duarte, Valérie Gauthier, Nicole Lucante, Amandine Marty, Maryline Pauchon, Jean-Philippe Pichon, Nicolas Ribière, Gwenn Trotoux, Philippe Blanchard, Nathalie Rivière, Jean-Pierre Martinant, Jérôme Pauquet BMC Genomics 2013, 14:120 (22 February 2013) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
		Research article MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum Sarah M Schmidt, Petra M Houterman, Ines Schreiver, Lisong Ma, Stefan Amyotte, Biju Chellappan, Sjef Boeren, Frank L W Takken, Martijn Rep BMC Genomics 2013, 14:119 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora Esley Heizer, Dante S Zarlenga, Bruce Rosa, Xin Gao, Robin B Gasser, Jessie De Graef, Peter Geldhof, Makedonka Mitreva BMC Genomics 2013, 14:118 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution Rafik Neme, Diethard Tautz BMC Genomics 2013, 14:117 (21 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Globin gene expression in correlation with G protein-related genes during erythroid differentiation Vladan P Čokić, Reginald D Smith, Angélique Biancotto, Constance T Noguchi, Raj K Puri, Alan N Schechter BMC Genomics 2013, 14:116 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Analysis of the genomic sequence of Philosamia cynthia nucleopolyhedrin virus and comparison with Antheraea pernyi nucleopolyhedrin virus Heying Qian, Yuehua Zhang, Yejun Wu, Pingiang Sun, Shanying Zhu, Xijie Guo, Kun Gao, Anying Xu, Wenbing Wang BMC Genomics 2013, 14:115 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Mitochondrial genomes of two Sinochlora species (Orthoptera): novel genome rearrangements and recognition sequence of replication origin Chunxiang Liu, Jia Chang, Chuan Ma, Ling Li, Shanyi Zhou BMC Genomics 2013, 14:114 (20 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Systematic analysis of palatal transcriptome to identify cleft palate genes within TGFβ3-knockout mice alleles: RNA-Seq analysis of TGFβ3 Mice Ferhat Ozturk, You Li, Xiujuan Zhu, Chittibabu Guda, Ali Nawshad BMC Genomics 2013, 14:113 (20 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed

	All
		Research article A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation Glenn T Howe, Jianbin Yu, Brian Knaus, Richard Cronn, Scott Kolpak, Peter Dolan, W Walter Lorenz, Jeffrey FD Dean BMC Genomics 2013, 14:137 (28 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article A Drosophila functional evaluation of candidates from human genome-wide association studies of type 2 diabetes and related metabolic traits identifies tissue-specific roles for dHHEX Jay Pendse, Prasanna V Ramachandran, Jianbo Na, Narisu Narisu, Jill L Fink, Ross L Cagan, Francis S Collins, Thomas J Baranski BMC Genomics 2013, 14:136 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum Amanda K Gibson, Zach Smith, Clay Fuqua, Keith Clay, John K Colbourne BMC Genomics 2013, 14:135 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Horizontal transfer of OC1 transposons in the Tasmanian devil Clement Gilbert, Paul Waters, Cedric Feschotte, Sarah Schaack BMC Genomics 2013, 14:134 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Pathway-focused bioassays and transcriptome analysis contribute to a better activity monitoring of complex herbal remedies Angela Klein, Oliver A Wrulich, Marcel Jenny, Peter Gruber, Kathrin Becker, Dietmar Fuchs, Johanna M Gostner, Florian Überall BMC Genomics 2013, 14:133 (27 February 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article Accurate indel prediction using paired-end short reads Dominik Grimm, Jörg Hagmann, Daniel Koenig, Detlef Weigel, Karsten Borgwardt BMC Genomics 2013, 14:132 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genome-wide detection of copy number variations using high-density SNP genotyping platforms in Holsteins Li Jiang, Jicai Jiang, Jie Yang, Xuan Liu, Jiying Wang, Haifei Wang, Xiangdong Ding, Jianfeng Liu, Qin Zhang BMC Genomics 2013, 14:131 (27 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Identification and functional analysis of cytochrome P450 complement in Streptomyces virginiae IBL14 Zhi-Zhen Li, Xiao-Fei Li, Wei Yang, Xiang Dong, Jie Yu, Shu-Liang Zhu, Man Li, Li Xie, Wang-Yu Tong BMC Genomics 2013, 14:130 (27 February 2013) Abstract \| Full text \| PDF \| PubMed
		Database Neurocarta: aggregating and sharing disease-gene relations for the neurosciences Elodie Portales-Casamar, Carolyn Ch’ng, Frances Lui, Nicolas St-Georges, Anton Zoubarev, Artemis Y Lai, Mark Lee, Cathy Kwok, Willie Kwok, Luchia Tseng, Paul Pavlidis BMC Genomics 2013, 14:129 (26 February 2013) Abstract \| Full text \| PDF \| PubMed
		Methodology article A Poisson hierarchical modelling approach to detecting copy number variation in sequence coverage data Nuno Sepúlveda, Susana G Campino, Samuel A Assefa, Colin J Sutherland, Arnab Pain5, Taane G Clark BMC Genomics 2013, 14:128 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Genetic analysis of the Trichuris muris-induced model of colitis reveals QTL overlap and a novel gene cluster for establishing colonic inflammation Scott E Levison, Paul Fisher, Jenny Hankinson, Leo Zeef, Steve Eyre, William E Ollier, John T McLaughlin, Andy Brass, Richard K Grencis, Joanne L Pennock BMC Genomics 2013, 14:127 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Global analysis of transcriptional regulators in Staphylococcus aureus Jose Antonio Ibarra, Ernesto Pérez-Rueda, Ronan K Carroll, Lindsey N Shaw BMC Genomics 2013, 14:126 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article De novo assembly and characterization of transcriptome using Illumina paired-end sequencing and identification of CesA gene in ramie (Boehmeria nivea L. Gaud) Touming Liu, Siyuan Zhu, Qingming Tang, Ping Chen, Yongting Yu, Shouwei Tang BMC Genomics 2013, 14:125 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Massive screening of copy number population-scale variation in Bos taurus genome Francesco Cicconardi, Giovanni Chillemi, Anna Tramontano, Cinzia Marchitelli, Alessio Valentini, Paolo Ajmone-Marsan, Alessandro Nardone BMC Genomics 2013, 14:124 (26 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Comparative transcriptomics of early dipteran development Eva Jiménez-Guri, Jaime Huerta-Cepas, Luca Cozzuto, Karl R Wotton, Hui Kang, Heinz Himmelbauer, Guglielmo Roma, Toni Gabaldón, Johannes Jaeger BMC Genomics 2013, 14:123 (24 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Comparative genomics using teleost fish helps to systematically identify target gene bodies of functionally defined human enhancers Nazia Parveen, Ayesha Masood, Nouman Iftikhar, Bushra F Minhas, Rashid Minhas, Uzma Nawaz, Amir Ali Abbasi BMC Genomics 2013, 14:122 (23 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism Lea Atanasova, Stephane Le Crom, Sabine Gruber, Fanny Coulpier, Verena Seidl-Seiboth, Christian P Kubicek, Irina S Druzhinina BMC Genomics 2013, 14:121 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L Régine Delourme, Cyril Falentin, Berline Fomeju, Marie Boillot, Gilles Lassalle, Isabelle André, Jorge Duarte, Valérie Gauthier, Nicole Lucante, Amandine Marty, Maryline Pauchon, Jean-Philippe Pichon, Nicolas Ribière, Gwenn Trotoux, Philippe Blanchard, Nathalie Rivière, Jean-Pierre Martinant, Jérôme Pauquet BMC Genomics 2013, 14:120 (22 February 2013) Abstract \| Full text \| PDF \| PubMed \| Cited on BioMed Central
		Research article MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum Sarah M Schmidt, Petra M Houterman, Ines Schreiver, Lisong Ma, Stefan Amyotte, Biju Chellappan, Sjef Boeren, Frank L W Takken, Martijn Rep BMC Genomics 2013, 14:119 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora Esley Heizer, Dante S Zarlenga, Bruce Rosa, Xin Gao, Robin B Gasser, Jessie De Graef, Peter Geldhof, Makedonka Mitreva BMC Genomics 2013, 14:118 (22 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution Rafik Neme, Diethard Tautz BMC Genomics 2013, 14:117 (21 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Globin gene expression in correlation with G protein-related genes during erythroid differentiation Vladan P Čokić, Reginald D Smith, Angélique Biancotto, Constance T Noguchi, Raj K Puri, Alan N Schechter BMC Genomics 2013, 14:116 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Analysis of the genomic sequence of Philosamia cynthia nucleopolyhedrin virus and comparison with Antheraea pernyi nucleopolyhedrin virus Heying Qian, Yuehua Zhang, Yejun Wu, Pingiang Sun, Shanying Zhu, Xijie Guo, Kun Gao, Anying Xu, Wenbing Wang BMC Genomics 2013, 14:115 (20 February 2013) Abstract \| Full text \| PDF \| PubMed
		Research article Mitochondrial genomes of two Sinochlora species (Orthoptera): novel genome rearrangements and recognition sequence of replication origin Chunxiang Liu, Jia Chang, Chuan Ma, Ling Li, Shanyi Zhou BMC Genomics 2013, 14:114 (20 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed
		Research article Systematic analysis of palatal transcriptome to identify cleft palate genes within TGFβ3-knockout mice alleles: RNA-Seq analysis of TGFβ3 Mice Ferhat Ozturk, You Li, Xiujuan Zhu, Chittibabu Guda, Ali Nawshad BMC Genomics 2013, 14:113 (20 February 2013) Abstract \| Full text \| PDF \| ePUB \| PubMed