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Editor-in-Chief
Melissa Norton, MD Biology Editor
Penelope Webb, PhD In-house Editor
Erik Alexandersson
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 BMC Genomics, Volume 9
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Research article
 
Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA
Nalini Polavarapu, Leonardo Marino-Ramirez, David Landsman, John F. McDonald, I. King Jordan
BMC Genomics 2008, 9:226 (17May2008)
[Abstract] [Provisional PDF]
Research article
Comparative analysis of transcriptional profiling of CD3+, CD4+ and CD8+ T cells identifies novel immune response players in T-Cell activation
Min Wang, Dirk Windgassen, Eleftherios T Papoutsakis
BMC Genomics 2008, 9:225 (16May2008)
[Abstract] [Provisional PDF]
Research article
The complete mitochondrial genomes for three Toxocara species of human and animal health significance
Ming-Wei Li, Rui-Qing Lin, Hui-Qun Song, Xiang-Yun Wu, Xing-Quan Zhu
BMC Genomics 2008, 9:224 (16May2008)
[Abstract] [Provisional PDF]
Research article
A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers
Thomas Moen, Ben Hayes, Matthew Baranski, Paul R Berg, Sissel Kjoglum, Ben F Koop, Willie S Davidson, Stig W Omholt, Sigbjorn Lien
BMC Genomics 2008, 9:223 (15May2008)
[Abstract] [Provisional PDF]
Research article
Extensive Expansion and Diversification of the Chemokine Gene Family in Zebrafish: Identification of a Novel Chemokine Subfamily CX
Hisayuki Nomiyama, Kunio Hieshima, Naoki Osada, Yoko Kato-Unoki, Kaori Otsuka-Ono, Sumio Takegawa, Toshiaki Izawa, Akio Yoshizawa, Yutaka Kikuchi, Sumio Tanase, Retsu Miura, Jun Kusuda, Miki Nakao, Osamu Yoshie
BMC Genomics 2008, 9:222 (15May2008)
[Abstract] [Provisional PDF]
Methodology article
Improved microarray gene expression profiling of virus-infected cells after removal of viral RNA
Matthijs Raaben, Penn Whitley, Diane Bouwmeester, Robert A Setterquist, Peter JM Rottier, Cornelis AM de Haan
BMC Genomics 2008, 9:221 (14May2008)
[Abstract] [Provisional PDF]
Research article
Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling
Arthur G Hunt, Ruqiang Xu, Balasubrahmanyam Addepalli, Suryadevara Rao, Kevin P Forbes, Lisa R Meeks, Denghui Xing, Min Mo, Hongwei Zhao, Amrita Bandyopadhyay, Lavanya Dampanaboina, Amanda Marion, Carol Von Lanken, Qingshun Q Li
BMC Genomics 2008, 9:220 (14May2008)
[Abstract] [Provisional PDF]
Research article
How Athila retrotransposons survive in the Arabidopsis genome
Antonio Marco, Ignacio Marin
BMC Genomics 2008, 9:219 (14May2008)
[Abstract] [Provisional PDF]
Research article
Expansion of signaling genes for adaptive immune system evolution in early vertebrates
Kinya Okada, Kiyoshi Asai
BMC Genomics 2008, 9:218 (14May2008)
[Abstract] [Provisional PDF]
Research article
Biocomputational prediction of small non-coding RNAs in Streptomyces
Josef Panek, Jan Bobek, Karel Mikulik, Marek Basler, Jiri Vohradsky
BMC Genomics 2008, 9:217 (13May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Global analysis of aberrant pre-mRNA splicing in glioblastoma using exon expression arrays
Hannah C Cheung, Keith A Baggerly, Spiridon Tsavachidis, Linda L Bachinski, Valerie L Neubauer, Tamara J Nixon, Kenneth D Aldape, Gilbert J Cote, Ralf Krahe
BMC Genomics 2008, 9:216 (12May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Complete Sequence and Analysis of the Mitochondrial Genome of Hemiselmis andersenii CCMP644 (Cryptophyceae)
Eunsoo Kim, Christopher E Lane, Bruce A Curtis, Catherine Kozera, Sharen Bowman, John M Archibald
BMC Genomics 2008, 9:215 (12May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
A universal DNA mini-barcode for biodiversity analysis
Isabelle Meusnier, Gregory AC Singer, Jean-Francois Landry, Donal A Hickey, Paul DN Hebert, Mehrdad Hajibabaei
BMC Genomics 2008, 9:214 (12May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Genomic and bioinformatics analysis of human adenovirus type 37:
New insights into corneal tropism
Christopher M Robinson, Fatemeh Shariati, Allison F Gillaspy, David W Dyer, James Chodosh
BMC Genomics 2008, 9:213 (9May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Loss of p24 function in Drosophila melanogaster causes a stress response and increased levels of NF-kappaB-regulated gene products
Kara A Boltz, Ginger E Carney
BMC Genomics 2008, 9:212 (8May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES 293 (West Pacific) strains
Rose Ann Cattolico, Michael A. Jacobs, Yang Zhou, Jean Chang, Melinda Duplessis, Terry Lybrand, John McKay, Han Chuan Ong, Elizabeth Sims, Gabrielle Rocap
BMC Genomics 2008, 9:211 (8May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Genomics of an extreme psychrophile, Psychromonas ingrahamii
Monica Riley, James T. Staley, Antoine Danchin, TingZhang Wang, Thomas S. Brettin, Loren J. Hauser, Miriam L. Land, Linda S. Thompson
BMC Genomics 2008, 9:210 (6May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
In vivo gene expression profiling of human intestinal epithelial cells: analysis by laser microdissection of formalin fixed tissues
Michael D George, Jan Wehkamp, Robert J Kays, Christian M Leutenegger, Sadiah Sabir, Irina Grishina, Satya Dandekar, Charles L Bevins
BMC Genomics 2008, 9:209 (5May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Database
RETINOBASE: a web database, data mining and analysis platform for gene expression data on retina
Ravi Kiran Reddy Kalathur, Nicolas Gagniere, Guillaume Berthommier, Laetitia Poidevin, Wolfgang Raffelsberger, Raymond Ripp, Thierry L veillard, Olivier Poch
BMC Genomics 2008, 9:208 (5May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Analysis of the distribution of functionally relevant rare codons
Michael Widmann, Marie Clairo, Juergen Dippon, Juergen Pleiss
BMC Genomics 2008, 9:207 (5May2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
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