Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Hans Zauner PhD
BMC Evolutionary Biology publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 7 Suppl 1
First International Conference on Phylogenomics
Proceedings
from First International Conference on Phylogenomics
Sainte-Ad
le, Qu
bec, Canada. 15
19 March, 2006
Edited by Herv
Philippe, Mathieu Blanchette
Introduction
Overview of the First Phylogenomics Conference Herv Philippe, Mathieu Blanchette BMC Evolutionary Biology 2007, 7 (Suppl 1):S1 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Software
SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics B atrice Roure, Naiara Rodriguez-Ezpeleta, Herv Philippe BMC Evolutionary Biology 2007, 7 (Suppl 1):S2 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Inferring angiosperm phylogeny from EST data with widespread gene duplication Michael J Sanderson, Michelle M McMahon BMC Evolutionary Biology 2007, 7 (Suppl 1):S3 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model Nicolas Lartillot, Henner Brinkmann, Herv Philippe BMC Evolutionary Biology 2007, 7 (Suppl 1):S4 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Methodology
Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data Le Bao, Hong Gu, Katherine A Dunn, Joseph P Bielawski BMC Evolutionary Biology 2007, 7 (Suppl 1):S5 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Rapid divergence of codon usage patterns within the rice genome Huai-Chun Wang, Donal A Hickey BMC Evolutionary Biology 2007, 7 (Suppl 1):S6 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Phylogenetic signal and functional categories in Proteobacteria genomes I aki Comas, Andr s Moya, Fernando Gonz lez-Candelas BMC Evolutionary Biology 2007, 7 (Suppl 1):S7 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
The role of laterally transferred genes in adaptive evolution Pradeep Reddy Marri, Weilong Hao, G Brian Golding BMC Evolutionary Biology 2007, 7 (Suppl 1):S8 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Detecting non-coding selective pressure in coding regions Hui Chen, Mathieu Blanchette BMC Evolutionary Biology 2007, 7 (Suppl 1):S9 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Identifying dramatic selection shifts in phylogenetic trees Karin S Dorman BMC Evolutionary Biology 2007, 7 (Suppl 1):S10 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Long-wavelength sensitive visual pigments of the guppy (Poecilia reticulata ): six opsins expressed in a single individual Cameron J Weadick, Belinda SW Chang BMC Evolutionary Biology 2007, 7 (Suppl 1):S11 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
FlowerPower: clustering proteins into domain architecture classes for phylogenomic inference of protein function Nandini Krishnamurthy, Duncan Brown, Kimmen Sj lander BMC Evolutionary Biology 2007, 7 (Suppl 1):S12 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
RNase MRP and the RNA processing cascade in the eukaryotic ancestor Michael D Woodhams, Peter F Stadler, David Penny, Lesley J Collins BMC Evolutionary Biology 2007, 7 (Suppl 1):S13 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human Zhaolei Zhang, Andy Wing Chun Pang, Mark Gerstein BMC Evolutionary Biology 2007, 7 (Suppl 1):S14 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Evolution of motif variants and positional bias of the cyclic-AMP response element Brandon Smith, Hung Fang, Youlian Pan, P Roy Walker, A Fazel Famili, Marianna Sikorska BMC Evolutionary Biology 2007, 7 (Suppl 1):S15 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Assembly rules for protein networks derived from phylogenetic-statistical analysis of whole genomes Mark Pagel, Andrew Meade, Daniel Scott BMC Evolutionary Biology 2007, 7 (Suppl 1):S16 (8 February 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
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