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BMC Evolutionary Biology

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Editor-in-Chief
Melissa Norton, MD

Biology Editor
Penelope Webb, PhD

In-house Editor
Hans Zauner PhD



 

 

BMC Evolutionary Biology publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 7 Suppl 1
First International Conference on Phylogenomics
Proceedings
from First International Conference on Phylogenomics
Sainte-Adle, Qubec, Canada. 1519 March, 2006
Edited by Herv Philippe, Mathieu Blanchette

Introduction
Overview of the First Phylogenomics Conference
Herv Philippe, Mathieu Blanchette
BMC Evolutionary Biology 2007, 7(Suppl 1):S1 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Software
SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics
Batrice Roure, Naiara Rodriguez-Ezpeleta, Herv Philippe
BMC Evolutionary Biology 2007, 7(Suppl 1):S2 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Inferring angiosperm phylogeny from EST data with widespread gene duplication
Michael J Sanderson, Michelle M McMahon
BMC Evolutionary Biology 2007, 7(Suppl 1):S3 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model
Nicolas Lartillot, Henner Brinkmann, Herv Philippe
BMC Evolutionary Biology 2007, 7(Suppl 1):S4 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology
Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data
Le Bao, Hong Gu, Katherine A Dunn, Joseph P Bielawski
BMC Evolutionary Biology 2007, 7(Suppl 1):S5 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research
Rapid divergence of codon usage patterns within the rice genome
Huai-Chun Wang, Donal A Hickey
BMC Evolutionary Biology 2007, 7(Suppl 1):S6 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Phylogenetic signal and functional categories in Proteobacteria genomes
Iaki Comas, Andrs Moya, Fernando Gonzlez-Candelas
BMC Evolutionary Biology 2007, 7(Suppl 1):S7 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research
The role of laterally transferred genes in adaptive evolution
Pradeep Reddy Marri, Weilong Hao, G Brian Golding
BMC Evolutionary Biology 2007, 7(Suppl 1):S8 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Detecting non-coding selective pressure in coding regions
Hui Chen, Mathieu Blanchette
BMC Evolutionary Biology 2007, 7(Suppl 1):S9 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Identifying dramatic selection shifts in phylogenetic trees
Karin S Dorman
BMC Evolutionary Biology 2007, 7(Suppl 1):S10 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Long-wavelength sensitive visual pigments of the guppy (Poecilia reticulata): six opsins expressed in a single individual
Cameron J Weadick, Belinda SW Chang
BMC Evolutionary Biology 2007, 7(Suppl 1):S11 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research
FlowerPower: clustering proteins into domain architecture classes for phylogenomic inference of protein function
Nandini Krishnamurthy, Duncan Brown, Kimmen Sjlander
BMC Evolutionary Biology 2007, 7(Suppl 1):S12 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
RNase MRP and the RNA processing cascade in the eukaryotic ancestor
Michael D Woodhams, Peter F Stadler, David Penny, Lesley J Collins
BMC Evolutionary Biology 2007, 7(Suppl 1):S13 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human
Zhaolei Zhang, Andy Wing Chun Pang, Mark Gerstein
BMC Evolutionary Biology 2007, 7(Suppl 1):S14 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Evolution of motif variants and positional bias of the cyclic-AMP response element
Brandon Smith, Hung Fang, Youlian Pan, P Roy Walker, A Fazel Famili, Marianna Sikorska
BMC Evolutionary Biology 2007, 7(Suppl 1):S15 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research
Assembly rules for protein networks derived from phylogenetic-statistical analysis of whole genomes
Mark Pagel, Andrew Meade, Daniel Scott
BMC Evolutionary Biology 2007, 7(Suppl 1):S16 (8February2007)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

 

 

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