Articles
Volume 11 Supplement 4
UT-ORNL-KBRIN Bioinformatics Summit 2010
Meeting abstracts
UT-ORNL-KBRIN Bioinformatics Summit 2010
Cadiz, KY, USA
19-21 March 2010
Edited by Eric C Rouchka, Robert M Flight and Claire Rinehart
Funding for the UT-ORNL-KBRIN Summit is provided in part by The Kentucky Biomedical Research Infrastructure Network (KBRIN), the University of Tennessee Molecular Resource Center, The UT-ORNL Science Alliance, The University of Tennessee Center for Integrative and Translational Genomics, and NIH grant P20RR16481.
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Introduction
Proceedings of the ninth annual UT-ORNL-KBRIN Bioinformatics Summit 2010 Eric C Rouchka, Robert M Flight, Claire Rinehart BMC Bioinformatics 2010, 11(Suppl 4):I1 (23 July 2010) |
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Oral presentation
Pathway- and network-based analysis of GWAS data revealed susceptibility gene sets to schizophrenia Peilin Jia, Zhongming Zhao BMC Bioinformatics 2010, 11(Suppl 4):O1 (23 July 2010) |
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Oral presentation
Subsystems-based servers for rapid annotation of genomes and metagenomes Ramy Aziz BMC Bioinformatics 2010, 11(Suppl 4):O2 (23 July 2010) |
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Oral presentation
Genomic analysis of a rare human tumor Steven JM Jones, Janessa Laskin, Yvonne Y Li, Obi L Griffith, Jianghong An, Mikhail Bilenky, Yaron S Butterfield, Timothee Cezard, Eric Chuah, Richard Corbett, Anthony Fejes, Malachi Griffith, John Yee, Montgomery Martin, Michael Mayo, Nataliya Melnyk, Ryan D Morin, Trevor J Pugh, Tesa Severson, Sohrab P Shah, Margaret Sutcliffe, Angela Tam, Jefferson Terry, Nina Thiessen, Thomas Thomson, Richard Varhol, Thomas Zeng, Yongjun Zhao, Richard A Moore, David G Huntsman, Inanc Birol, Martin Hirst, Robert A Holt, Marco A Marra et al. BMC Bioinformatics 2010, 11(Suppl 4):O3 (23 July 2010) |
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Oral presentation
Association of genomewide newborn DNA methylation patterns with maternal and newborn characteristics Ronald M Adkins, Julia Krushkal, Steven Zeisel, Chandrika Piyathilake, Fran Tylavsky, Grant Somes BMC Bioinformatics 2010, 11(Suppl 4):O4 (23 July 2010) |
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Oral presentation
Sudhir Naswa, Gary L Rogers, Rachel M Lynch, Stephen A Kania, Suchita Das, Elissa J Chesler, Arnold M Saxton, Brynn H Voy, Michael A Langston BMC Bioinformatics 2010, 11(Suppl 4):O5 (23 July 2010) |
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Oral presentation
Robert L Hettich, Alison L Russell, Nathan C VerBerkmoes, Manesh Shah, Claire Fraser-Liggett, Janet K Jansson BMC Bioinformatics 2010, 11(Suppl 4):O6 (23 July 2010) |
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Oral presentation
High-throughput sequencing of the DBA/2J mouse genome Xusheng Wang, Richa Agarwala, John A Capra, Zugen Chen, Deanna M Church, Daniel C Ciobanu, Zhengsheng Li, Lu Lu, Khyobeni Mozhui, Megan K Mulligan, Stanley F Nelson, Katherine S Pollard, Williams L Taylor, Donald B Thomason, Robert W Williams BMC Bioinformatics 2010, 11(Suppl 4):O7 (23 July 2010) |
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Oral presentation
Analysis of equine protein-coding gene structure and expression by RNA-sequencing Stephen J Coleman, Zheng Zeng, Jinze Liu, James N MacLeod BMC Bioinformatics 2010, 11(Suppl 4):O8 (23 July 2010) |
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Poster presentation
Gipsy Majumdar, Rajendra Raghow BMC Bioinformatics 2010, 11(Suppl 4):P1 (23 July 2010) |
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Poster presentation
Identifying potential drugs that induce QT prolongation using electronic medical records Mei Liu, Joshua C Denny, Subramani Mani, Yukun Chen, Yong Hu, Hua Xu BMC Bioinformatics 2010, 11(Suppl 4):P2 (23 July 2010) |
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Poster presentation
LiPeng Bi, Chad Groce, Cheryl Davis BMC Bioinformatics 2010, 11(Suppl 4):P3 (23 July 2010) |
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Poster presentation
SNPlotz: a generic genome plot tool to aid the SNP association studies Zhi-Liang Hu, Rex Fernando, Dorian Garrick, James M Reecy BMC Bioinformatics 2010, 11(Suppl 4):P4 (23 July 2010) |
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Poster presentation
Slim-Prim: an integrated data system for clinical and translational research Teeradache Viangteeravat, Ian M Brooks, Somchan Vuthipadadon, Emin Kuscu, Naga Nagisetty, Ebony Smith, Ramin Homayouni, Chanchai S McDonald BMC Bioinformatics 2010, 11(Suppl 4):P5 (23 July 2010) |
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Poster presentation
Elissaveta Arnaoudova, Jerzy W Jaromczyk, Neil Moore, Christopher L Schardl, Ruriko Yoshida BMC Bioinformatics 2010, 11(Suppl 4):P6 (23 July 2010) |
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Poster presentation
Nan Zhao, Jean-Luc Ferrer, Xiaofeng Zhuang, Feng Chen BMC Bioinformatics 2010, 11(Suppl 4):P7 (23 July 2010) |
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Poster presentation
Ramy Aziz BMC Bioinformatics 2010, 11(Suppl 4):P8 (23 July 2010) |
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Poster presentation
Daniel Harris, Jerzy W Jaromczyk, Christopher L Schardl BMC Bioinformatics 2010, 11(Suppl 4):P9 (23 July 2010) |
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Poster presentation
WebGestalt2: an updated and expanded version of the Web-based Gene Set Analysis Toolkit Dexter Duncan, Naresh Prodduturi, Bing Zhang BMC Bioinformatics 2010, 11(Suppl 4):P10 (23 July 2010) |
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Poster presentation
Bioinformatic analysis of gene regulation in the metal-reducing bacterial family Geobacteraceae Julia Krushkal, Ronald M Adkins, Yanhua Qu, Jeanette Peeples, Sreedhar Sontineni, Ching Leang, Peter Brown, Nelson D Young, Toshiyuki Ueki, Katy Juarez, Derek R Lovley BMC Bioinformatics 2010, 11(Suppl 4):P11 (23 July 2010) |
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Poster presentation
Ramy K Aziz, Bruce J Aronow, William L Taylor, Sarah L Rowe, Rita Kansal, Mark J Walker, Malak Kotb BMC Bioinformatics 2010, 11(Suppl 4):P12 (23 July 2010) |
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Poster presentation
Shephali Bhatnagar, Siva K Panguluri, Robert F Lundy, Ashok Kumar BMC Bioinformatics 2010, 11(Suppl 4):P13 (23 July 2010) |
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Poster presentation
Developing measures for microbial genome assembly quality control Rachel M Adams, Jason B Harris, Jeremy J Jay, Beth G Johnson, Miriam L Land, Loren J Hauser BMC Bioinformatics 2010, 11(Suppl 4):P14 (23 July 2010) |
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Poster presentation
Sequence and annotation of the Wizard007 mycobacterium phage genome Ejike Anyanwu, Kaitlyn Cole, Karlee Driver, Anthony Falcone, Elizabeth Farnsworth, Benjamin Howard, Brittney Howard, Courtney Howard, Rodney King, Jordan Olberding, Mackenzie Perkins, Claire Rinehart, Heidi Sayre, Tyler Scaff, Sarah Schrader, Prasanna Parthasarathy, Cynthia Tope BMC Bioinformatics 2010, 11(Suppl 4):P15 (23 July 2010) |
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Poster presentation
Leon Dent, Dana Marshall, Robert Hulette, Siddharth Pratap BMC Bioinformatics 2010, 11(Suppl 4):P16 (23 July 2010) |
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Poster presentation
A Bayesian change-point algorithm for detecting copy number alteration Fridtjof Thomas, Stanley Pounds BMC Bioinformatics 2010, 11(Suppl 4):P17 (23 July 2010) |
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Poster presentation
A two-step approach to qPCR experimental design and software for data analysis Huazhang Guo, Larry Tague, Ramesh Ray, Gabor Tigyi BMC Bioinformatics 2010, 11(Suppl 4):P18 (23 July 2010) |
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Poster presentation
Linking genotype to phenotype with Bayesian network modeling of Jesse D Ziebarth, Bao Li, Isao Miyairi, Yan Cui BMC Bioinformatics 2010, 11(Suppl 4):P19 (23 July 2010) |
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Poster presentation
The HHMI National Genomics Research Initiative at Western Kentucky University Rodney A King, Claire Rinehart, Prasanna Parthasarathy BMC Bioinformatics 2010, 11(Suppl 4):P20 (23 July 2010) |
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Poster presentation
Gary L Rogers, Pablo Moscato, Michael A Langston BMC Bioinformatics 2010, 11(Suppl 4):P21 (23 July 2010) |
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Poster presentation
Understanding molecular recognition and epitope prediction from Information Theoretic approach Indranil Mitra, Yan Cui BMC Bioinformatics 2010, 11(Suppl 4):P22 (23 July 2010) |
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Poster presentation
Hung-Chung Huang, Siyuan Zheng, Zhongming Zhao BMC Bioinformatics 2010, 11(Suppl 4):P23 (23 July 2010) |
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Poster presentation
Serendipitous discoveries in microarray analysis Sally R Ellingson, Charles A Phillips, Randy Glenn, Douglas Swanson, Thomas Ha, Daniel Goldowitz, Michael A Langston BMC Bioinformatics 2010, 11(Suppl 4):P24 (23 July 2010) |
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Poster presentation
The UofL Microarray Facility: merger and new location S Waigel, Xiaohong Li, Yinlu Chen, Vennila Arumugam, Nigel GF Cooper, Wolfgang Zacharias BMC Bioinformatics 2010, 11(Suppl 4):P25 (23 July 2010) |
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Poster presentation
Growth hormone induces proliferation in the zebrafish inner ear Michael E Smith, Huifang Sun, Julie B Schuck, Shunsuke Moriyama BMC Bioinformatics 2010, 11(Suppl 4):P26 (23 July 2010) |
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Poster presentation
Development of tools for the automated analysis of spectra generated by tandem mass spectrometry Sally Ellingson, Joe Hughes, Dylan Storey, Rick Weber, Nathan VerBerkmoes BMC Bioinformatics 2010, 11(Suppl 4):P27 (23 July 2010) |
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Poster presentation
Do pathogenic bacteria encode more secreted proteins than their non-pathogenic relatives? Ahmed Mahmoud, Ramy Aziz BMC Bioinformatics 2010, 11(Suppl 4):P28 (23 July 2010) |
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Poster presentation
Enabling proteomics-based identification of human cancer variations Jing Li, Zeqiang Ma, Robbert JC Slebos, David L Tabb, Daniel C Liebler, Bing Zhang BMC Bioinformatics 2010, 11(Suppl 4):P29 (23 July 2010) |
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Poster presentation
Statistical analysis of multiple significance test methods for differential proteomics Bing Wang, Fahim Mohammad, Jun Zhang, Xinmin Yin, Eric Rouchka, Xiang Zhang BMC Bioinformatics 2010, 11(Suppl 4):P30 (23 July 2010) |
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Poster presentation
Design of a DNA-based shift register Christy M Gearheart, Eric C Rouchka, Benjamin Arazi BMC Bioinformatics 2010, 11(Suppl 4):P31 (23 July 2010) |
