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Volume 4 (2003) - September 2003

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Methodology article   Open Access Highly Accessed

RSEARCH: Finding homologs of single structured RNA sequences

Robert J Klein, Sean R Eddy BMC Bioinformatics 2003, 4:44 (22 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling

Yee Yap, Xue Zhang, Antoine Danchin BMC Bioinformatics 2003, 4:43 (20 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access

Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals

Soren Prag, Josephine C Adams BMC Bioinformatics 2003, 4:42 (17 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

The COG database: an updated version includes eukaryotes

Roman L Tatusov, Natalie D Fedorova, John D Jackson, Aviva R Jacobs, Boris Kiryutin, Eugene V Koonin, Dmitri M Krylov, Raja Mazumder, Sergei L Mekhedov, Anastasia N Nikolskaya, B Sridhar Rao, Sergei Smirnov, Alexander V Sverdlov, Sona Vasudevan, Yuri I Wolf, Jodie J Yin, Darren A Natale BMC Bioinformatics 2003, 4:41 (11 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

Methodology article   Open Access

Probabilistic estimation of microarray data reliability and underlying gene expression

Sven Bilke, Thomas Breslin, Mikael Sigvardsson BMC Bioinformatics 2003, 4:40 (10 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Software   Open Access

cDNA2Genome: A tool for mapping and annotating cDNAs

Coral del Val, Karl-Heinz Glatting, Sandor Suhai BMC Bioinformatics 2003, 4:39 (10 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Software   Open Access Highly Accessed

Genome-wide prediction, display and refinement of binding sites with information theory-based models

Sashidhar Gadiraju, Carrie A Vyhlidal, J Steven Leeder, Peter K Rogan BMC Bioinformatics 2003, 4:38 (8 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction.

Hanga C Galfalvy, Loubna Erraji-Benchekroun, Peggy Smyrniotopoulos, Paul Pavlidis, Steven P Ellis, J John Mann, Etienne Sibille, Victoria Arango BMC Bioinformatics 2003, 4:37 (8 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Methodology article   Open Access

Cluster stability scores for microarray data in cancer studies

Mark Smolkin, Debashis Ghosh BMC Bioinformatics 2003, 4:36 (6 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Software   Open Access Highly Accessed

OrthoParaMap: Distinguishing orthologs from paralogs by integrating comparative genome data and gene phylogenies

Steven B Cannon, Nevin D Young BMC Bioinformatics 2003, 4:35 (2 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Database   Open Access

ELISA: Structure-Function Inferences based on statistically significant and evolutionarily inspired observations

Boris E Shakhnovich, John M Harvey, Steve Comeau, David Lorenz, Charles DeLisi, Eugene Shakhnovich BMC Bioinformatics 2003, 4:34 (2 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Evaluation of normalization methods for microarray data

Taesung Park, Sung-Gon Yi, Sung-Hyun Kang, SeungYeoun Lee, Yong-Sung Lee, Richard Simon BMC Bioinformatics 2003, 4:33 (2 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central


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