Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Danielle Burgess PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 8 Suppl 2
Probabilistic Modeling and Machine Learning in Structural and Systems Biology
Research
from Probabilistic Modeling and Machine Learning in Structural and Systems Biology
Tuusula, Finland. 17
18 June 2006
Edited by Samuel Kaski, Juho Rousu, Esko Ukkonen
Introduction
Probabilistic modeling and machine learning in structural and systems biology Samuel Kaski, Juho Rousu, Esko Ukkonen BMC Bioinformatics 2007, 8 (Suppl 2):S1 (3 May 2007) [Abstract ] [Full text ] [PDF ]
Research
Bayesian model-based inference of transcription factor activity Simon Rogers, Raya Khanin, Mark Girolami BMC Bioinformatics 2007, 8 (Suppl 2):S2 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregressive process Rainer Opgen-Rhein, Korbinian Strimmer BMC Bioinformatics 2007, 8 (Suppl 2):S3 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Inferring biological networks with output kernel trees Pierre Geurts, Nizar Touleimat, Marie Dutreix, Florence d'Alch -Buc BMC Bioinformatics 2007, 8 (Suppl 2):S4 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Validating module network learning algorithms using simulated data Tom Michoel, Steven Maere, Eric Bonnet, Anagha Joshi, Yvan Saeys, Tim Van den Bulcke, Koenraad Van Leemput, Piet van Remortel, Martin Kuiper, Kathleen Marchal, Yves Van de Peer BMC Bioinformatics 2007, 8 (Suppl 2):S5 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Robust imputation method for missing values in microarray data Dankyu Yoon, Eun-Kyung Lee, Taesung Park BMC Bioinformatics 2007, 8 (Suppl 2):S6 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Model order selection for bio-molecular data clustering Alberto Bertoni, Giorgio Valentini BMC Bioinformatics 2007, 8 (Suppl 2):S7 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
A novel Bayesian approach to quantify clinical variables and to determine their spectroscopic counterparts in 1 H NMR metabonomic data Aki Vehtari, Ville-Petteri M kinen, Pasi Soininen, Petri Ingman, Sanna M M kel , Markku J Savolainen, Minna L Hannuksela, Kimmo Kaski, Mika Ala-Korpela BMC Bioinformatics 2007, 8 (Suppl 2):S8 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Constrained hidden Markov models for population-based haplotyping Niels Landwehr, Taneli Mielik inen, Lauri Eronen, Hannu Toivonen, Heikki Mannila BMC Bioinformatics 2007, 8 (Suppl 2):S9 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Comparative analysis of long DNA sequences by per element information content using different contexts Trevor I Dix, David R Powell, Lloyd Allison, Julie Bernal, Samira Jaeger, Linda Stern BMC Bioinformatics 2007, 8 (Suppl 2):S10 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Methods for estimating human endogenous retrovirus activities from EST databases Merja Oja, Jaakko Peltonen, Jonas Blomberg, Samuel Kaski BMC Bioinformatics 2007, 8 (Suppl 2):S11 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
Research
Improved functional prediction of proteins by learning kernel combinations in multilabel settings Volker Roth, Bernd Fischer BMC Bioinformatics 2007, 8 (Suppl 2):S12 (3 May 2007) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ] [Cited on BioMed Central ]
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