- John S Garavelli, University of Delaware
- Adam Godzik, Sanford-Burnham Medical Research Institute and UCSD
- Lawrence Hunter, University of Colorado Denver
- Igor Jurisica, Ontario Cancer Institute
- Adam Olshen, University of California, San Francisco
- Hanchuan Peng, Allen Institute for Brain Science
- Graziano Pesole, University of Bari
- Mihai Pop, University of Maryland
- Irene Pala, BioMed Central
Taxonomic Analysis by Elimination and Correction outperforms other tools in estimating taxonomic composition at a very low rank, especially when closely related species/strains exist in a metagenomic sample.
MoTeX-II is a word-based high-performance computing tool for single and structured MoTif eXtraction from large-scale datasets where runtime does not depend on the length of motifs, the size of the alphabet, or the error thresholds
A comprehensive analysis pipeline and workflow provides detailed research data reports for RNA-Seq; the software is available as multi-threaded version for cluster use or single thread for a virtual machine
COPS introduces an optimized vectorization of the Viterbi decoding algorithm built to work with the HMMER tool suite to improve speed of biological sequence analysis, with long and short models being processed up to two times faster.
Metavir 2 provides a user-friendly comprehensive analysis environment for viral metagenomes, including tools for multiple comparison and analysis, both from raw reads and from contig-assembled viromes.
BMC Bioinformatics 2014, 15:280
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BMC Bioinformatics is an open access, peer-reviewed journal that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling and analysis of all kinds of biological data, as well as other areas of computational biology.
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Volume 15 Suppl 8 (14 July 2014)
Selected articles from the Third IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS 2013): Bioinformatics
New Orleans, LA, USA. 12-14 June 2013
Volume 15 Suppl 7 (28 May 2014)
Provo, UT, USA. 5-6 December 2013
Volume 15 Suppl 6 (16 May 2014)