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What google maps can do for biomedical data dissemination: examples and a design study
Radu Jianu, David H Laidlaw BMC Research Notes 2013, 6:179 (4 May 2013)
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Treetrimmer: a method for phylogenetic dataset size reduction
Shinichiro Maruyama, Robert JM Eveleigh, John M Archibald BMC Research Notes 2013, 6:145 (12 April 2013)
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CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes
Dann Turner, Darren Reynolds, Donald Seto, Padmanabhan Mahadevan BMC Research Notes 2013, 6:140 (8 April 2013)
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The PinkThing for analysing ChIP profiling data in their genomic context
Fiona G Nielsen, Maarten Kooyman, Philip Kensche, Hendrik Marks, Henk Stunnenberg, Martijn Huynen BMC Research Notes 2013, 6:133 (4 April 2013)
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5.
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Molars and incisors: show your microarray IDs
Virginie Laugel-Haushalter, Marie Paschaki, Christelle Thibault-Carpentier, Doulaye Dembelé, Pascal Dollé, Agnès Bloch-Zupan BMC Research Notes 2013, 6:113 (26 March 2013)
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De novo transcriptomic resources for two sibling species of moths: Ostrinia nubilalis and O. scapulalis
Bernhard Gschloessl, Emmanuelle Beyne, Philippe Audiot, Denis Bourguet, Réjane Streiff BMC Research Notes 2013, 6:73 (28 February 2013)
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SHIFT: Server for hidden stops analysis in frame-shifted translation
Arun Gupta, Tiratha Raj Singh BMC Research Notes 2013, 6:68 (23 February 2013)
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Suitability of endogenous reference genes for gene expression studies with human intraocular endothelial cells
Ruoxin Wei, Elizabeth Anne Stewart, Winfried M Amoaku BMC Research Notes 2013, 6:46 (4 February 2013)
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Intra-platform comparison of 25-mer and 60-mer oligonucleotide Nimblegen DNA microarrays
Stephane Fenart, Malika Chabi, Sophie Gallina, Rudy Huis, Godfrey Neutelings, Nathalie Riviere, Brigitte Thomasset, Simon Hawkins, Anca Lucau-Danila BMC Research Notes 2013, 6:43 (4 February 2013)
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A fast approach to global alignment of protein-protein interaction networks
Giorgos Kollias, Madan Sathe, Shahin Mohammadi, Ananth Grama BMC Research Notes 2013, 6:35 (31 January 2013)
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11.
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Quality assessment metrics for whole genome gene expression profiling of paraffin embedded samples
Douglas W Mahoney, Terry M Therneau, S Keith Anderson, Jin Jen, Jean-Pierre A Kocher, Monica M Reinholz, Edith A Perez, Jeanette E Eckel-Passow BMC Research Notes 2013, 6:33 (30 January 2013)
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Empirical assessment of sequencing errors for high throughput pyrosequencing data
Paulo GS da Fonseca, Jorge AP Paiva, Luiz GP Almeida, Ana TR Vasconcelos, Ana T Freitas BMC Research Notes 2013, 6:25 (22 January 2013)
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Optimization of a high-throughput whole blood expression profiling methodology and its application to assess the pharmacodynamics of interferon (IFN) beta-1a or polyethylene glycol-conjugated IFN beta-1a in healthy clinical trial subjects
Normand E Allaire, Steven E Bushnell, Jadwiga Bienkowska, Graham Brock, John Carulli BMC Research Notes 2013, 6:8 (5 January 2013)
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The impact of voluntary exercise on relative telomere length in a rat model of developmental stress
Martmari Botha, Laurian Grace, Kishor Bugarith, Vivienne A Russell, Martin Kidd, Soraya Seedat, Sian MJ Hemmings BMC Research Notes 2012, 5:697 (27 December 2012)
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Validation of MIMGO: a method to identify differentially expressed GO terms in a microarray dataset
Yoichi Yamada, Hiroki Sawada, Ken-ichi Hirotani, Masanobu Oshima, Kenji Satou BMC Research Notes 2012, 5:680 (12 December 2012)
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In silico approach to predict candidate R proteins and to define their domain architecture
Walter Sanseverino, Maria Raffaella Ercolano BMC Research Notes 2012, 5:678 (8 December 2012)
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Whole genome phylogenies for multiple Drosophila species
Arun Seetharam, Gary W Stuart BMC Research Notes 2012, 5:670 (4 December 2012)
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Optimization of quantitative polymerase chain reactions for detection and quantification of eight periodontal bacterial pathogens
Ellen Decat, Jan Cosyn, Hugo De Bruyn, Reza Miremadi, Bart Saerens, Els Van Mechelen, Stefan Vermeulen, Mario Vaneechoutte, Pieter Deschaght BMC Research Notes 2012, 5:664 (2 December 2012)
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Estimating misclassification error: a closer look at cross-validation based methods
Songthip Ounpraseuth, Shelly Y Lensing, Horace J Spencer, Ralph L Kodell BMC Research Notes 2012, 5:656 (28 November 2012)
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Sequence based analysis of U-2973, a cell line established from a double-hit B-cell lymphoma with concurrent MYC and BCL2 rearrangements
Sean D Hooper, Xiang Jiao, Elisabeth Sundström, Farah L Rehman, Christian Tellgren-Roth, Tobias Sjöblom, Lucia Cavelier BMC Research Notes 2012, 5:648 (22 November 2012)
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21.
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Challenges of the information age: the impact of false discovery on pathway identification
Colin J Rog, Srinivasa C Chekuri, Mary E Edgerton BMC Research Notes 2012, 5:647 (21 November 2012)
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22.
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Two common profiles exist for genomic oligonucleotide frequencies
Shang-Hong Zhang, Lei Wang BMC Research Notes 2012, 5:639 (17 November 2012)
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An Always Correlated gene expression landscape for ovine skeletal muscle, lessons learnt from comparison with an “equivalent” bovine landscape
Wei Sun, Nicholas J Hudson, Antonio Reverter, Ashley J Waardenberg, Ross L Tellam, Tony Vuocolo, Keren Byrne, Brian P Dalrymple BMC Research Notes 2012, 5:632 (13 November 2012)
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Comments on: Interpretation of genome-wide infinium methylation data from ligated DNA in formalin-fixed paraffin-embedded paired tumor and normal tissue
Christina Thirlwell, Andrew Feber, Matthias Lechner, Andrew E Teschendorff, Stephan Beck BMC Research Notes 2012, 5:631 (13 November 2012)
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Association studies of the copy-number variable ß-defensin cluster on 8p23.1 in adenocarcinoma and chronic pancreatitis
Stefan Taudien, Gabor Gäbel, Oliver Kuss, Marco Groth, Robert Grützmann, Klaus Huse, Alexander Kluttig, Andreas Wolf, Michael Nothnagel, Philip Rosenstiel, Karin Halina Greiser, Karl Werdan, Michael Krawczak, Christian Pilarsky, Matthias Platzer BMC Research Notes 2012, 5:629 (13 November 2012)
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