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Editor-in-Chief
Melissa Norton, MD Biology Editor
Penelope Webb, PhD In-house Editor
Andrea Bucceri
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| | BMC Molecular Biology, Volume 9 |
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Research article
 
Genomic actions of 1,25-dihydroxyvitamin D3 on insulin receptor gene expression, insulin receptor number and insulin activity in the kidney, liver and adipose tissue of streptozotocin-induced diabetic rats.
Consuelo Calle, Begona Maestro, Moises Garcia-Arencibia
BMC Molecular Biology 2008, 9:65 (18July2008)
[Abstract] [Provisional PDF]
Methodology article
Selection of housekeeping genes for gene expression studies in the adult rat submandibular gland under normal, inflamed, atrophic and regenerative states
Nicholas Silver, Emanuele Cotroneo, Gordon Proctor, Samira Osailan, Katherine L Paterson, Guy H Carpenter
BMC Molecular Biology 2008, 9:64 (17July2008)
[Abstract] [Provisional PDF]
Research article
Quantification of mRNA in single cells and modelling of RT-qPCR induced noise
Martin Bengtsson, Martin Hemberg, Patrik Rorsman, Anders Stahlberg
BMC Molecular Biology 2008, 9:63 (17July2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Housekeeping while brain's storming:
Validation of normalizing factors for gene expression studies
in a murine model of traumatic brain injury
Herve Rhinn, Catherine Marchand-Leroux, Nicole Croci, Michel Plotkine, Daniel Scherman, Virginie Escriou
BMC Molecular Biology 2008, 9:62 (8July2008)
[Abstract] [Provisional PDF] [PubMed] [Related articles]
Research article
Phosphorylation at Ser473 regulates heterochromatin protein 1 binding and corepressor function of TIF1beta/KAP1
Chiung-Wen Chang, Han-Yi Chou, Yu-Sheng Lin, Kuo-Hsiang Huang, Ching-Jin Chang, Tsui-Chun Hsu, Sheng-Chung Lee
BMC Molecular Biology 2008, 9:61 (1July2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Off-target effects of siRNA specific for GFP
Cordula Tschuch, Angela Schulz, Armin Pscherer, Wiebke Werft, Axel Benner, Agnes Hotz-Wagenblatt, Leticia Serra Barrionuevo, Peter Lichter, Daniel Mertens
BMC Molecular Biology 2008, 9:60 (24June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Validation of internal control for gene expression study in soybean by quantitative real-time PCR
Bo Jian, Bin Liu, Yurong Bi, Wensheng Hou, Cunxiang Wu, Tianfu Han
BMC Molecular Biology 2008, 9:59 (23June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Systemic RNAi mediated gene silencing in the anhydrobiotic nematode Panagrolaimus superbus
Adam J Shannon, Trevor Tyson, Ilona Dix, Jacqueline Boyd, Ann M Burnell
BMC Molecular Biology 2008, 9:58 (19June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
TATA binding protein associated factor 3 (TAF3) interacts with p53 and inhibits its function
Orsolya Bereczki, Zsuzsanna Ujfaludi, Norbert Pardi, Zita Nagy, Laszlo Tora, Imre M Boros, Eva Balint
BMC Molecular Biology 2008, 9:57 (12June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Identification of a candidate alternative promoter region of the human Bcl2L11 (Bim) gene
Margherita Gaviraghi, Andrea Caricasole, Chiara Costanzo, Daniela Diamanti, Mario Dandrea, Massimo Donadelli, Aldo Scarpa, Marta Palmieri
BMC Molecular Biology 2008, 9:56 (12June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
LTR retrotransposons and the evolution of dosage compensation in Drosophila
Lilya V Matyunina, Nathan J Bowen, John F McDonald
BMC Molecular Biology 2008, 9:55 (4June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Methodology article
A novel universal real-time PCR system using the attached universal duplex probes for quantitative analysis of nucleic acids
Litao Yang, Wanqi Liang, Lingxi Jiang, Wenquan Li, Wei Cao, Zoe A Wilson, Dabing Zhang
BMC Molecular Biology 2008, 9:54 (4June2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Selection of reference genes for quantitative real-time PCR in a rat asphyxial cardiac arrest model
Kristina Langnaese, Robin John, Hannes Schweizer, Uwe Ebmeyer, Gerburg Keilhoff
BMC Molecular Biology 2008, 9:53 (28May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
IRES-mediated translation of the carboxy-terminal domain of the horizontal cell specific connexin Cx55.5 in vivo and in vitro
Mahboob Ul-Hussain, Georg Zoidl, Jan Klooster, Maarten Kamermans, Rolf Dermietzel
BMC Molecular Biology 2008, 9:52 (27May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Characterization and expression patterns of a membrane-bound trehalase from Spodoptera exigua
Bin Tang, Xiaofei Chen, Yang Liu, Honggang Tian, Jian Liu, Jian Hu, Weihua Xu, Wenqing Zhang
BMC Molecular Biology 2008, 9:51 (20May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Comparative in silico analysis identifies bona fide MyoD binding sites within the Myocyte Stress 1 gene promoter
Samir Ounzain, Caroline S Dacwag, Nilesh J Samani, Anthony N Imbalzano, Nelson W Chong
BMC Molecular Biology 2008, 9:50 (19May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Exercise induced stress in horses: Selection of the most stable reference genes for quantitative RT-PCR normalization
Katia Cappelli, Michela Felicetti, Stefano Capomaccio, Giacomo Spinsanti, Maurizio Silvestrelli, Andrea Verini Supplizi
BMC Molecular Biology 2008, 9:49 (19May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
The BsaHI restriction-modification system: Cloning, sequencing and analysis of conserved motifs
Robert K Neely, Richard J Roberts
BMC Molecular Biology 2008, 9:48 (14May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Distinct and stage specific nuclear factors regulate the expression of falcipains, Plasmodium falciparum cysteine proteases
Sujatha Sunil, Virander S Chauhan, Pawan Malhotra
BMC Molecular Biology 2008, 9:47 (14May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Identification of valid reference genes for the normalization of RT qPCR gene expression data in human brain tissue
David TR Coulson, Simon Brockbank, Joseph G Quinn, Suzanne Murphy, Rivka Ravid, G Brent Irvine, Janet A Johnston
BMC Molecular Biology 2008, 9:46 (6May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Characterization of two functional NKX3.1 binding sites upstream of the PCAN1 gene that are involved in the positive regulation of PCAN1 gene transcription
Wenwen Liu, Pengju Zhang, Weiwen Chen, Chunxiao Yu, Fuai Cui, Feng Kong, Jianye Zhang, Anli Jiang
BMC Molecular Biology 2008, 9:45 (4May2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
A GATA4/WT1 cooperation regulates transcription of genes required for mammalian sex determination and differentiation
Yoko Miyamoto, Hiroaki Taniguchi, Fr dric Hamel, David W Silversides, Robert S Viger
BMC Molecular Biology 2008, 9:44 (29April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Molecular characterization of senescence marker protein-30 gene promoter: Identification of repressor elements and functional nuclear factor binding sites
Bandita Rath, Ravi S Pandey, Priya R Debata, Naoki Maruyama, Prakash C Supakar
BMC Molecular Biology 2008, 9:43 (29April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Methodology article
Mutation detection using ENDO1: Application to disease diagnostics in humans and TILLING and Eco-TILLING in plants
Karine Triques, Elodie Piednoir, Marion Dalmais, Julien Schmidt, Christine Le Signor, Mark Sharkey, Michel Caboche, Bndicte Sturbois, Abdelhafid Bendahmane
BMC Molecular Biology 2008, 9:42 (23April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Interaction of circadian clock proteins PER2 and CRY with BMAL1 and CLOCK
Sonja Langmesser, Tiziano Tallone, Alain Bordon, Sandro Rusconi, Urs Albrecht
BMC Molecular Biology 2008, 9:41 (22April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
DNA watermarks: A proof of concept
Dominik Heider, Angelika Barnekow
BMC Molecular Biology 2008, 9:40 (21April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
DNA demethylation-dependent enhancement of toll-like receptor-2 gene expression in cystic fibrosis epithelial cells involves SP1-activated transcription
Takashi Furuta, Tsuyoshi Shuto, Shogo Shimasaki, Yuko Ohira, Mary Ann Suico, Dieter C Gruenert, Hirofumi Kai
BMC Molecular Biology 2008, 9:39 (21April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
The calcium channel  2 (CACNB2) subunit repertoire in teleosts
Alicia M Ebert, Catherine A McAnelly, Ashok Srinivasan, Rachel Lockridge Mueller, David B Garrity, Deborah M Garrity
BMC Molecular Biology 2008, 9:38 (17April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Gene transfer of Hodgkin cell lines via multivalent anti-CD30 scFv displaying bacteriophage
Yoon-Suk A Chung, Katja Sabel, Martin Kr nke, Alexander Klimka
BMC Molecular Biology 2008, 9:37 (16April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Drosophila Uri, a PP1 binding protein, is essential for viability, maintenance of DNA integrity and normal transcriptional activity
Jasmin Kirchner, Emese Vissi, Sascha Gross, Balazs Szoor, Andrey Rudenko, Luke Alphey, Helen White-Cooper
BMC Molecular Biology 2008, 9:36 (15April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Transcriptional profile of the homologous recombination machinery and characterization of the EhRAD51 recombinase in response to DNA damage in Entamoeba histolytica
Mavil L pez-Casamichana, Esther Orozco, Laurence A Marchat, Csar Lpez-Camarillo
BMC Molecular Biology 2008, 9:35 (10April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Methodology article
miR-Q: a novel quantitative RT-PCR approach for the expression profiling of small RNA molecules such as miRNAs in a complex sample
Soroush Sharbati-Tehrani, Barbara Kutz-Lohroff, Ramona Bergbauer, Jutta Scholven, Ralf Einspanier
BMC Molecular Biology 2008, 9:34 (10April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
The katG mRNA of Mycobacterium tuberculosis and Mycobacterium smegmatis is processed at its 5' end and is stabilized by both a polypurine sequence and translation initiation
Claudia Sala, Francesca Forti, Francesca Magnoni, Daniela Ghisotti
BMC Molecular Biology 2008, 9:33 (4April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
HMG-box domain stimulation of RAG1/2 cleavage activity is metal ion dependent
Aleksei N Kriatchko, Serge Bergeron, Patrick C Swanson
BMC Molecular Biology 2008, 9:32 (1April2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Novel forms of Paired-like homeodomain transcription factor 2 (PITX2): Generation by alternative translation initiation and mRNA splicing
Pankaj Lamba, Tord A Hjalt, Daniel J Bernard
BMC Molecular Biology 2008, 9:31 (28March2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Characterization of the human DYRK1A promoter and its regulation by the transcription factor E2F1
Barbara Maenz, Paul Hekerman, Eva M Vela, Juan Galceran, Walter Becker
BMC Molecular Biology 2008, 9:30 (26March2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Association of ATRX with pericentric heterochromatin and the Y chromosome of neonatal mouse spermatogonia
Claudia Baumann, Anja Schmidtmann, Kathrin Muegge, Rabindranath De La Fuente
BMC Molecular Biology 2008, 9:29 (13March2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Selection of housekeeping genes for gene expression studies in larvae from flatfish using real-time PCR
Carlos Infante, Makoto P Matsuoka, Esther Asensio, Jos Pedro Ca avate, Michael Reith, Manuel Manchado
BMC Molecular Biology 2008, 9:28 (6March2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Essential and distinct roles of the F-box and helicase domains of Fbh1 in DNA damage repair
Chikako Sakaguchi, Takashi Morishita, Hideo Shinagawa, Takashi Hishida
BMC Molecular Biology 2008, 9:27 (3March2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Characterization of human mesenchymal stem cell secretome at early steps of adipocyte and osteoblast differentiation
Chiara Chiellini, Olivia Cochet, Luc Negroni, Michel Samson, Marjorie Poggi, Grard Ailhaud, Marie-Christine Alessi, Christian Dani, Ez-Zoubir Amri
BMC Molecular Biology 2008, 9:26 (26February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
The Mre11 protein interacts with both Rad50 and the HerA bipolar helicase and is recruited to DNA following gamma irradiation in the archaeon Sulfolobus acidocaldarius
Achim Quaiser, Florence Constantinesco, Malcolm F White, Patrick Forterre, Christiane Elie
BMC Molecular Biology 2008, 9:25 (22February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
hMMS2 serves a redundant role in human PCNA polyubiquitination
Jan Brun, Roland Chiu, Katherine Lockhart, Wei Xiao, Bradly G Wouters, Douglas A Gray
BMC Molecular Biology 2008, 9:24 (19February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Ligand-induced sequestering of branchpoint sequence allows conditional control of splicing
Dong-Suk Kim, Veronica Gusti, Kenneth J Dery, Rajesh K Gaur
BMC Molecular Biology 2008, 9:23 (12February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
A novel mutant of the Sup35 protein of Saccharomyces cerevisiae defective in translation termination and in GTPase activity still supports cell viability
Cline Fabret, Bruno Cosnier, Sergey Lekomtsev, Sylvie Gillet, Isabelle Hatin, Pierre Le Marchal, Jean Pierre Rousset
BMC Molecular Biology 2008, 9:22 (11February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Comparative genomic analysis of the arthropod muscle myosin heavy chain genes allows ancestral gene reconstruction and reveals a new type of 'partially' processed pseudogene
Florian Odronitz, Martin Kollmar
BMC Molecular Biology 2008, 9:21 (6February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Methodology article
Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa
Biliana Lesic, Laurence G Rahme
BMC Molecular Biology 2008, 9:20 (4February2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Molecular characterization and expression analysis of five different elongation factor 1 alpha genes in the flatfish Senegalese sole (Solea senegalensis Kaup): Differential gene expression and thyroid hormones dependence during metamorphosis
Carlos Infante, Esther Asensio, Jos Pedro Caavate, Manuel Manchado
BMC Molecular Biology 2008, 9:19 (30January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Housekeeping genes for quantitative expression studies in the three-spined stickleback Gasterosteus aculeatus
Sascha Hibbeler, Joern P Scharsack, Sven Becker
BMC Molecular Biology 2008, 9:18 (29January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Reference genes for normalization of gene expression studies in human osteoarthritic articular cartilage
Manuel Pombo-Suarez, Manuel Calaza, Juan J Gomez-Reino, Antonio Gonzalez
BMC Molecular Biology 2008, 9:17 (29January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]
Research article
Expression of yeast lipid phosphatase Sac1p is regulated by phosphatidylinositol-4-phosphate
Andreas Kndler, Gerlinde Konrad, Peter Mayinger
BMC Molecular Biology 2008, 9:16 (28January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Iron-dependent degradation of IRP2 requires its C-terminal region and IRP structural integrity
Jian Wang, Guohua Chen, Julie Lee, Kostas Pantopoulos
BMC Molecular Biology 2008, 9:15 (28January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Simultaneous targeted exchange of two nucleotides by single-stranded oligonucleotides clusters within a region of about fourteen nucleotides
Heike Hegele, Matthias Wuepping, Caroline Ref, Oliver Kenner, Dieter Kaufmann
BMC Molecular Biology 2008, 9:14 (28January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Analysis of the transcriptional activity of endogenous NFAT5 in primary cells using transgenic NFAT-luciferase reporter mice
Beatriz Morancho, Jordi Minguilln, Jeffery D Molkentin, Cristina Lpez-Rodr guez, Jose Aramburu
BMC Molecular Biology 2008, 9:13 (25January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Differential regulation of the two transcriptional activation domains of the coiled-coil coactivator CoCoA by sumoylation
Catherine K Yang, Jeong Hoon Kim, David K Ann, Michael R Stallcup
BMC Molecular Biology 2008, 9:12 (25January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Ror2 modulates the canonical Wnt signaling in lung epithelial cells through cooperation with Fzd2
Changgong Li, Hongyan Chen, Lingyan Hu, Yiming Xing, Tomoyo Sasaki, Maria F Villosis, John Li, Michiru Nishita, Yasuhiro Minami, Parviz Minoo
BMC Molecular Biology 2008, 9:11 (23January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Alternative splicing and differential subcellular localization of the rat FGF antisense gene product
Shuo Cheng Zhang, Kimberley A MacDonald, Mark Baguma-Nibasheka, Laurette Geldenhuys, Alan G Casson, Paul R Murphy
BMC Molecular Biology 2008, 9:10 (23January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Selection and validation of a set of reliable reference genes for quantitative sod gene expression analysis in C. elegans
David Hoogewijs, Koen Houthoofd, Filip Matthijssens, Jo Vandesompele, Jacques R Vanfleteren
BMC Molecular Biology 2008, 9:9 (22January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
The human SIN3B corepressor forms a nucleolar complex with leukemia-associated ETO homologues
Rakesh Singh Dhanda, Sofia Rondin Lindberg, Inge Olsson
BMC Molecular Biology 2008, 9:8 (19January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Substrate specificity of new methyl-directed DNA endonuclease GlaI
Galina V Tarasova, Tatiana N Nayakshina, Sergey KH Degtyarev
BMC Molecular Biology 2008, 9:7 (15January2008)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]
Research article
Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis
Hailing Jin, Vladimir Vacic, Thomas Girke, Stefano Lonardi, Jian-Kang Zhu
BMC Molecular Biology 2008, 9:6 (14January2008)
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Research article
Regulation of mouse Scgb3a1 gene expression by NF-Y and association of CpG methylation with its tissue-specific expression
Takeshi Tomita, Shioko Kimura
BMC Molecular Biology 2008, 9:5 (14January2008)
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Research article
The Paf1 complex promotes displacement of histones upon rapid induction of transcription by RNA polymerase II
Heather A Marton, Stephen Desiderio
BMC Molecular Biology 2008, 9:4 (14January2008)
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Methodology article
Preamplification techniques for real-time RT-PCR analyses of endomyocardial biopsies
Michel Noutsias, Maria Rohde, Andrea Block, Katrin Klippert, Olga Lettau, Katja Blunert, Michael Hummel, Uwe K hl, Hans Lehmkuhl, Roland Hetzer, Ursula Rauch, Wolfgang Poller, Matthias Pauschinger, Heinz P Schultheiss, Hans D Volk, Katja Kotsch
BMC Molecular Biology 2008, 9:3 (14January2008)
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