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BMC Bioinformatics publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 13 Supplement 13

Selected articles from The 8th Annual Biotechnology and Bioinformatics Symposium (BIOT-2011)

Research

The 8th Annual Biotechnology and Bioinformatics Symposium (BIOT-2011)

Houston, TX, USA

20-21 October 2011

Edited by Bradley M Broom, Devika Subramanian, Prahlad Ram, Jorge R Hersovic, Elmer V Bernstam

The organizer would like to thank the following companies for their support of the symposium: OnX Enterprise Solutions Ltd., Hewlett-Packard (HP), IBM, George R. Brown School of Engineering, Rice University, Department of Bioinformatics and Computational Biology, UT MD Anderson Cancer Center

Conference website

Research   Open Access

Sources of variation in false discovery rate estimation include sample size, correlation, and inherent differences between groups

Jiexin Zhang, Kevin R Coombes BMC Bioinformatics 2012, 13(Suppl 13):S1 (24 August 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Graph-based signal integration for high-throughput phenotyping

Jorge R Herskovic, Devika Subramanian, Trevor Cohen, Pamela A Bozzo-Silva, Charles F Bearden, Elmer V Bernstam BMC Bioinformatics 2012, 13(Suppl 13):S2 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Self consistency grouping: a stringent clustering method

Bong-Hyun Kim, Bhadrachalam Chitturi, Nick V Grishin BMC Bioinformatics 2012, 13(Suppl 13):S3 (24 August 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

An effective method for network module extraction from microarray data

Priyakshi Mahanta, Hasin A Ahmed, Dhruba K Bhattacharyya, Jugal K Kalita BMC Bioinformatics 2012, 13(Suppl 13):S4 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access Highly Accessed

Accuracy of RNA-Seq and its dependence on sequencing depth

Guoshuai Cai, Hua Li, Yue Lu, Xuelin Huang, Juhee Lee, Peter Müller, Yuan Ji, Shoudan Liang BMC Bioinformatics 2012, 13(Suppl 13):S5 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

BM-BC: a Bayesian method of base calling for Solexa sequence data

Yuan Ji, Riten Mitra, Fernando Quintana, Alejandro Jara, Peter Mueller, Ping Liu, Yue Lu, Shoudan Liang BMC Bioinformatics 2012, 13(Suppl 13):S6 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Identification of markers associated with global changes in DNA methylation regulation in cancers

Peng Qiu, Li Zhang BMC Bioinformatics 2012, 13(Suppl 13):S7 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Phylogenetic search through partial tree mixing

Kenneth Sundberg, Mark Clement, Quinn Snell, Dan Ventura, Michael Whiting, Keith Crandall BMC Bioinformatics 2012, 13(Suppl 13):S8 (24 August 2012)

Abstract | Full text | PDF | PubMed

Research   Open Access

Physicochemical property consensus sequences for functional analysis, design of multivalent antigens and targeted antivirals

Catherine H Schein, David M Bowen, Jessica A Lewis, Kyung Choi, Aniko Paul, Gerbrand J van der Heden van Noort, Wenzhe Lu, Dmitri V Filippov BMC Bioinformatics 2012, 13(Suppl 13):S9 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Model averaging strategies for structure learning in Bayesian networks with limited data

Bradley M Broom, Kim-Anh Do, Devika Subramanian BMC Bioinformatics 2012, 13(Suppl 13):S10 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences

Kevin Riehle, Cristian Coarfa, Andrew Jackson, Jun Ma, Arpit Tandon, Sameer Paithankar, Sriram Raghuraman, Toni-Ann Mistretta, Delphine Saulnier, Sabeen Raza, Maria Diaz, Robert Shulman, Kjersti Aagaard, James Versalovic, Aleksandar Milosavljevic BMC Bioinformatics 2012, 13(Suppl 13):S11 (24 August 2012)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central


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