Additional file 1.

Brownmove definition file for a constrained bead-spring polymer. This (ASCII text) file defines a bead-spring polymer for a brownmove simulation with five beads connected by springs between the direct and the next neighbours. Each bead has a single van-der-Waals sphere to prevent mutual overlap between the beads, a sphere for hydrodynamic interactions, and two to four hook-up points for the connecting springs. For further details see the comments in this protein definition file.

Format: BDEF Size: 4KB Download file

Geyer BMC Biophysics 2011 4:7   doi:10.1186/2046-1682-4-7