Simulation of particle agglomeration and analysis via a dynamic network. Sketch of the particles composed of two mutually displaced van-der-Waals spheres (A). As indicated in B, the particles can bind to each other with their red sides. The spatial snapshots are mapped onto an interaction network by using a distance criterion. The resulting dynamic network is then used to analyse the simulation (C).
Geyer BMC Biophysics 2011 4:7 doi:10.1186/2046-1682-4-7