Table 3

Detailed overview of frequent DNA copy number aberrations (>30%) of tumors from UK patients.

chromosomal aberrations

flanking clones

position (bp)

segment size

gains

losses

start

end

start

end

(Mb)


1p36.33-p36.21

RP11-206L10

RP4-636F13

672780

12417597

11.74

1p31.1

RP5-944F13

RP11-246O4

69815162

83112098

13.30

1p21.3-p13.3

RP11-146P11

RP5-1077K16

95695632

107389118

11.69

1q21.2-q23.1

RP4-790G17

RP11-214H6

146971278

153444622

6.47

1q31.1-q31.3

RP11-134C1

RP11-75C23

184717073

194242465

9.53

1q32.1-q32.2

RP11-150l7

RP11-564A8

197877387

203602276

5.72

3p26.3

RP11-385A18

RP11-129K1

46140

2377366

2.33

3p25.1-p24.1

RP11-255O19

RP11-99M10

15780361

30799547

15.02

3p14.2

RP11-170K19

RP11-114P15

59701329

62639806

2.94

3p12.3-p11.2

RP11-103P13

RP11-91M15

75146113

96627928

21.48

4p16.1-q35.2

RP11-61G19

CTC-963K6

10275012

191158370

180.88

5p15.33

RP11-811I15

CTD-2265D9

70262

2671745

2.60

5q11.1-q23.3

RP11-269M20

RP11-114H7

49913067

130460728

80.55

6p21.32-p21.1

RP11-79I1

RP11-121G20

33123932

44385866

11.26

7p22.3-p22.1

RP11-713A20

RP11-161C7

106471

6396697

6.29

7p11.2

RP11-449G3

RP11-34J24

54413814

55403627

0.99

7q22.1

RP11-10D8

RP11-163M5

98067793

101528379

3.46

7q36.1

RP11-89P11

RP11-43l19

147485335

151131938

3.65

7q36.3

RP11-58F7

RP11-120H14

157072238

158524109

1.45

8q24.12-q24.3

RP11-22A24

RP5-1109M23

120711365

146238749

25.53

9p24.3-p21.1

RP11-48M17

RP11-141J7

2136329

32469400

30.33

9q33.3-q34.3

RP11-205K6

RP11-424E7

126296075

138363252

12.07

10p15.3

RP11-631M21

RP11-74N14

50000

1789100

1.74

10p15.2

RP11-195B3

3293007

3338470

0.05

10q22.1

RP11-91A1

RP11-28E3

72033907

73573433

1.54

11p15.5-p15.4

CTC-908H22

RP11-304P12

178227

3140168

2.96

11q12.2-q13.5

RP11-286N22

RP11-30J7

60851860

76232373

15.38

12q21.2-q22

RP1-97G4

RP11-2K12

76228586

91346299

15.12

13q11-q12.11

RP11-94A1

RP11-61K9

18360157

19386914

1.03

13q21.2-q21.33

RP11-310K10

RP11-451E2A

60721181

71574154

10.85

13q32.3

RP11-19J14

RP11-113F15

97851594

99328275

1.48

13q33.3-q34

RP11-61I17

RP11-569D9

108847725

114103243

5.26

14q12

RP11-330O19

RP11-109D12

25538832

26345513

0.81

14q21.1-q21.3

RP11-88D14

RP11-94K16

36949212

48298851

11.35

14q31.1-q31.3

RP11-46l17

RP11-88N20

78630860

86772926

8.14

14q32.31-q32.33

RP11-367F11

RP11-815P21

101467534

105159201

3.69

15q14

RP11-294M6

RP11-79A5

33841939

35953471

2.11

16p13.3

CTD-2148K8

RP11-89M4

87754

4697230

4.61

16p13.2-p13.11

RP11-475D10

RP11-489O1

8598165

15572359

6.97

16p12.1-p11.2

RP11-142A12

RP11-18H23

26595069

31443695

4.85

16q21-q22.1

RP11-52B24

RP11-394B2

63708677

69365102

5.66

16q23.3-q24.3

RP11-483P21

RP11-566K11

82361609

88613383

6.25

17p13.3-p13.1

RP11-411G7

RP11-89A15

427024

8365794

7.94

17p11.2

RP11-524F11

RP1-162E17

17343389

19251691

1.91

17q11.2-q21.31

RP11-138P22

RP11-374N3

23133763

41096064

17.96

17q21.32-q21.33

RP11-234J24

RP11-506D12

42655422

46333070

3.68

17q22-q23.2

RP11-143M4

RP11-139B3

47607556

51363278

3.76

17q24.3-q25.3

RP11-65C22

RP11-258N23

68165339

78308832

10.14

18q11.2-q23

RP11-5G23

RP11-396D4

21431314

71337306

49.91

19p13.3-q13.43

RP11-110A24

GS1-1129C9

134914

63771717

63.64

20p13-q13.33

RP11-530N10

CTB-81F12

9943

62393015

62.38

21q11.2-q22.11

RP11-72P4

RP11-41N19

13857799

30673984

16.82

22q11.1-q11.21

RP11-81H21

RP11-586I18

14754982

18976359

4.22

22q12.3-q13.33

RP11-90I17

CTB-99K24

35686144

49397088

13.71


Buffart et al. BMC Medical Genomics 2011 4:7   doi:10.1186/1755-8794-4-7

Open Data