Table 4

Top scored cliques in each population network

Cliques

Country

GOTerm, DAVID-level3

Genes Identified in GO Terms


EP300, ESR1,

SP1, SMAD4,

JUN, SMAD2, SMAD3

USA(5.91)

GO:0045595

Regulation of cell differentiation

EP300, SMAD2, JUN


CHN(5.85)

GO:0045595

Regulation of cell differentiation

EP300, SMAD2, JUN


GO:0048522

Positive regulation of cellular process

EP300, SMAD2, SMAD3,

SMAD4, SP1, ESR1, JUN


CTNNB1, CREBBP, EP300, ESR1, SMAD2, SMAD3, SMAD4

GER (5.38)

CHN (5.48)

USA(5.341)

GO:0033993

Response to Lipid

EP300, SMAD2


GO:0010769

Regulation of cell morphogenesis

EP300, SMAD2


PTPN11, CBL, SRC, PRKCA, SHC1, PTPN6, EGFR

SA(3.75)

GO:0007173

Epidermal growth factor

Receptor signaling

EGFR, PRKCA, SHC, CBL, SRC, SHC1, PTPN11


GO:0071363

Response to growth factor stimulus

PRKCA, CBL, SHC


MCM10, MCM2, MCM3, MCM4, ORC2L, MCM6, MCM7

SA(4.19)

GO:0006270

DNA-dependent DNA replication initiation

ORC2L, MCM6


GO:0000082

G1/S transition of mitotic cell cycle

ORC2L, MCM6


CliqueStrength of each clique was represented in brackets with respect to the population in which it was identified

Pradhan et al. BMC Systems Biology 2012 6(Suppl 3):S17   doi:10.1186/1752-0509-6-S3-S17

Open Data