Table 2 |
||||||
|
The 10-fold cross-validation results by SVM classifiers based on different features and those by ensemble classifiers for 10 locations with respect to AUC scores, where the ensemble classifiers are the optimal combinations of different SVM classifiers trained on features without strikethrough. The numbers with strikethrough indicate the corresponding classifier was not used in the ensemble classifier. The numbers within the brackets denote the corresponding Gap. |
||||||
|
Localization |
threAA |
N-term |
C-term |
Gap1 |
Gap2 |
Ensemble |
|
|
||||||
|
Extracellular |
0.909 |
0.891 |
0.812 |
0.943(13) |
0.943(7) |
0.950 |
|
Cytoplasm |
0.652 |
0.653 |
0.643 |
0.637(15) |
0.630(5) |
0.738 |
|
ER |
0.789 |
0.681 |
0.703 |
0.811(11) |
0.806(13) |
0.827 |
|
Golgi apparatus |
0.748 |
0.791 |
0.764 |
0.732(7) |
0.729(5) |
0.848 |
|
Nucleus |
0.688 |
0.630 |
0.615 |
0.709(13) |
0.707(15) |
0.721 |
|
Mitochondrion |
0.722 |
0.781 |
0.665 |
0.805(15) |
0.802(13) |
0.833 |
|
Peroxisome |
0.808 |
0.797 |
0.777 |
0.816(15) |
0.815(13) |
0.882 |
|
Endosome |
0.705 |
0.787 |
0.795 |
0.860(13) |
0.848(11) |
0.895 |
|
Vacuole |
0.730 |
0.749 |
0.758 |
0.748(15) |
0.746(9) |
0.820 |
|
Cell membrane |
0.798 |
0.792 |
0.786 |
0.801(11) |
0.800(9) |
0.837 |
|
|
||||||
|
Sun et al. BMC Systems Biology 2010 4(Suppl 2):S12 doi:10.1186/1752-0509-4-S2-S12 |
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