Bioinformatic identification of proteins with tissue-specific expression for biomarker discovery
- Equal contributors
1 Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada
2 Department of Clinical Biochemistry, University Health Network, Toronto, ON, Canada
3 Department of Pathology and Laboratory Medicine, Mount Sinai Hospital, Toronto, ON, Canada
BMC Medicine 2012, 10:39 doi:10.1186/1741-7015-10-39Published: 19 April 2012
Additional file 1:
List of in-house proteomes. Table listing the cell lines and relevant biological fluids of previously characterized in-house proteomes.
Format: XLSX Size: 14KB Download file
Additional file 2:
List of all proteins initially identified. Table with lists of proteins identified in each database for each tissue.
Format: XLSX Size: 86KB Download file
Additional file 3:
Summary of total protein identification by each database. Table summarizing the number of proteins identified in each tissue, by each database.
Format: XLSX Size: 11KB Download file
Additional file 4:
List of the databases each protein was identified in. Table with number of databases a protein was identified in and which databases those were for proteins identified in one or more databases for each tissue.
Format: XLSX Size: 82KB Download file
Additional file 5:
Proteins identified in two or more databases and secreted or shed. Table listing the 143 proteins designated as secreted or shed from all tissues, which were identified in two or more databases.
Format: XLSX Size: 13KB Download file