Table 1

Encode scheme based on physiochemical properties of amino acids

Group

Residues

Description


g1

C

Highly conserved

g2

M

Hydrophobic

g3

N, Q

Amides, polar

Acids, positive,

g4

D, E

polar

g5

S, T

Alcohols

g6

P, A, G

Aliphatic, small

g7

I, V, L

Aliphatic

g8

F, Y, W

Aromatic

g9

H, K, R

Bases, charged


Yang and Yang BMC Genomics 2008 9(Suppl 2):S8   doi:10.1186/1471-2164-9-S2-S8

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