Table 3 |
||||||
|
Assessment of outlier removal and flooring. |
||||||
|
Techniques |
r |
Number of genes in opposite categories |
||||
|
|
||||||
|
Fum/O2 |
Fe/O2 |
Fe/Fum |
Fum/O2 |
Fe/O2 |
Fe/Fum |
|
|
|
||||||
|
No_outlier |
0.76 |
0.84 |
0.76 |
5 |
1 |
1 |
|
Outlier_p < 0.01 |
0.76 |
0.84 |
0.75 |
4 |
3 |
1 |
|
Outlier_p < 0.05 |
0.76 |
0.84 |
0.75 |
5 |
5 |
1 |
|
No floor |
0.76 |
0.85 |
0.77 |
2 |
6 |
2 |
|
Floor of 20 |
0.76 |
0.84 |
0.75 |
5 |
5 |
1 |
|
Floor of 50 |
0.77 |
0.84 |
0.78 |
5 |
4 |
1 |
|
Floor of 1% |
0.75 |
0.83 |
0.72 |
7 |
7 |
2 |
|
|
||||||
|
Both techniques are dispensable for type 2 microarray analyses. |
||||||
|
Yang et al. BMC Genomics 2008 9(Suppl 2):S5 doi:10.1186/1471-2164-9-S2-S5 |
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