Table 1 |
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Training examples in OAANN. |
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Concepts from BiologicalProcess |
Concepts from Pathway |
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lipoprotein_metabolic_process (0042157) |
vs. |
lipoprotein_metabolic_pathway (0000482) |
|
inositol_phosphate_metabolic_process (0043647) |
vs. |
inositol_phosphate_metabolic_pathway (0000154) |
|
glutathione_catabolic_process (0006751) |
vs. |
glutathione_metabolic_pathway (0000134) |
|
brassinosteroid_biosynthetic_process (0016132) |
vs. |
brassinosteroid_biosynthetic_pathway (0000552) |
|
gamma-aminobutyric_acid_catabolic_process (0009450) |
vs. |
gamma-aminobutyric_acid_metabolic_pathway (0000412) |
|
chondroitin_sulfate_biosynthetic_process (0030206) |
vs. |
chondroitin_sulfate_biosynthetic_pathway (0000195) |
|
generation_of_precursor_metabolites_and_energy (0010497) |
vs. |
energy_metabolic_pathway (248) |
|
acetylcholine_catabolic_process (0006581) |
vs. |
acetylcholine_metabolic_pathway (0000408) |
|
cell_cycle_checkpoint(0000075) |
vs. |
cell_cycle_checkpoint_pathway (0000094) |
|
DNA_replication_checkpoint (0000076) |
vs. |
G2/M_DNA_replication_checkpoint_pathway (0000385) |
|
purine_metabolic_process (0006143) |
vs. |
purine_metabolic_pathway (0000031) |
|
dopamine_catabolic_process (0042420) |
vs. |
dopamine_metabolic_pathway (0000409) |
|
epinephrine_catabolic_process (0042419) |
vs. |
epinephrine_metabolic_pathway (0000441) |
|
leukotriene_metabolic_process (0006691) |
vs. |
leukotriene_metabolic_pathway (0000464) |
|
norepinephrine_catabolic_process (0042422) |
vs. |
norepinephrine_metabolic_pathway (0000442) |
|
ganglioside_biosynthetic_process (0001574) |
vs. |
ganglioside_biosynthetic_pathway (0000164) |
|
glycine_catabolic_process (0006546) |
vs. |
glycine_metabolic_pathway (0000440) |
|
glucose_homeostasis (0042593) |
vs. |
glucose_homeostasis_pathway (0000553) |
|
aspartate_metabolic_process (0006531) |
vs. |
aspartate_metabolic_pathway (0000439) |
|
arachidonic_acid_metabolic_process (0019369) |
vs. |
arachidonic_acid_metabolic_pathway (0000460) |
|
histamine_catabolic_process (0001695) |
vs. |
histamine_metabolic_pathway (0000411) |
|
alanine_metabolic_process (0006522) |
vs. |
alanine_metabolic_pathway (0000438) |
|
glycogen_biosynthetic_process (0005978) |
vs. |
glycogen_biosynthetic_pathway (0000532) |
|
germ_cell_programmed_cell_death (0035234) |
vs. |
altered_programmed_cell_death (0000287) |
|
C21-steroid_hormone_catabolic_process (0008208) |
vs. |
C21-Steroid_hormone_metabolic_pathway (0000070) |
|
glycerophospholipid_metabolic_process (0006650) |
vs. |
glycerophospholipid_metabolic_pathway (0000354) |
|
regulated_secretory_pathway (0045055) |
vs. |
regulated_secretory_pathway (0000537) |
|
linoleic_acid_metabolic_process (0043651) |
vs. |
linoleic_acid_metabolic_pathway (0000523) |
|
serotonin_catabolic_process (0042429) |
vs. |
serotonin_metabolic_pathway (0000410) |
|
globoside_metabolic_process (0001575) |
vs. |
globoside_metabolic_pathway (0000196) |
|
|
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|
Huang et al. BMC Genomics 2008 9(Suppl 2):S16 doi:10.1186/1471-2164-9-S2-S16 |
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