Table 5

List of 18 genes in G. max with one homolog with non-synonymous/synonymous SNPs ratio > 1.

Homolog 1

Homolog 2

Functional Annotation


Glyma03g04950

Glyma01g32160

Protease inhibitor/seed storage/LTP family

Glyma06g14000

Glyma04g40790

Molecular chaperone (small heat-shock protein Hsp26/Hsp42)

Glyma06g19010

Glyma04g35940

Uncharacterized conserved protein, contains JmjC domain

Glyma06g40780

Glyma06g40740

Apoptotic ATPase

Glyma07g15110

Glyma01g00900

HAD superfamily, subfamily IIIB (Acid phosphatase)

Glyma08g14990

Glyma05g31750

PPR repeat|PPR repeat|PPR repeat|PPR repeat|PPR repeat|PPR repeat|PPR repeat

Glyma09g32240

Glyma07g09560

Uncharacterized conserved protein

Glyma11g09160

Glyma01g36280

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Glyma12g07280

Glyma11g20640

SUA5

Glyma15g09420

Glyma13g29590

Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily

Glyma15g10430

Glyma13g28680

gb def: putative formate dehydrogenase alpha subunit [thermococcus litoralis]

Glyma15g20000

Glyma09g08370

ATP-dependent RNA helicase

Glyma16g02950

Glyma07g06310

HISTONE H3

Glyma18g40190

Glyma07g16190

Iron/ascorbate family oxidoreductases

Glyma18g40210

Glyma07g16190

Iron/ascorbate family oxidoreductases

Glyma19g31230

Glyma03g28480

Pyrroline-5-carboxylate reductase

Glyma19g33520

Glyma03g30620

PNAS-3 RELATED

Glyma20g22690

Glyma10g28600

Predicted ABC-type transport, ATPase component/CCR4 associated factor


List of 18 gene pairs in G. max, with ratio of non-synonymous/synonymous SNPs > 1 in one homolog.

Joshi et al. BMC Genomics 2013 14(Suppl 1):S5   doi:10.1186/1471-2164-14-S1-S5

Open Data