Additional file 12: Figure S4..
Results of positive selection calculation are visualized on primary sequence of (A) PPP2R5C, (B) GBP1, (C) HEXB and (D) CASP8 pig proteins. Amino acids in green font are under purifying selection. Amino acids in orange and red font are under positive selection with posterior probabilities greater than 95% or 99%, respectively. Amino acids in white font target those for which no information is available (no calculation was performed by PAML due to at least one gap in the multiple sequence alignment at this position). Amino acids are in grey font where results are not significant enough to infer either purifying or positive selection. Protein domains, as predicted by InterPro resources (see Methods) are represented by colored bars under amino acid sequences.
Format: PPTX Size: 923KB Download file
Dawson et al. BMC Genomics 2013 14:332 doi:10.1186/1471-2164-14-332