Table 5

Accuracy of the gene-neutral two-stage and single classifiers.

Testing Gene

Training Genes

Two-stage Classifier

Single-stage Classifier


ALK

BRAF, EGFR, KIT, KRAS, MET, PTEN, WT1

68.6%

64.7%


BRAF

ALK, EGFR, KIT, KRAS, MET, PTEN, WT1

85.4%

84.6%


EGFR

ALK, BRAF, KIT, KRAS, MET, PTEN, WT1

78.0%

73.5%


KIT

ALK, BRAF, EGFR, KRAS, MET, PTEN, WT1

74.5%

70.3%


KRAS

ALK, BRAF, EGFR, KIT, MET, PTEN, WT1

87.0%

81.5%


MET

ALK, BRAF, EGFR, KIT, KRAS, PTEN, WT1

73.5%

41.5%


PTEN

ALK, BRAF, EGFR, KIT, KRAS, MET, WT1

78.3%

78.3%


WT1

ALK, BRAF, EGFR, KIT, KRAS, MET, PTEN

65.0%

55.7%


Average

76.3%

68.8%


Wu et al. BMC Genomics 2012 13(Suppl 8):S21   doi:10.1186/1471-2164-13-S8-S21

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