Table 2

Average precision for the intersection (*) of two methods.

x * y

Average precision

Number

of regions


Score combination

Rank combination


C * F = PeakSeq * SISSRs

0.887166

0.887675

13293

E * F = CisGenome * SISSRs

0.900260

0.885596

12841

C * E = PeakSeq * CisGenome

0.902211

0.892652

12662

C * D = PeakSeq * QuEST

0.910056

0.920872

11865

D * F = QuEST * SISSRs

0.911046

0.908774

10789

D * E = QuEST * CisGenome

0.914799

0.917028

14452

B * D = MACS * QuEST

0.938479

0.937476

14528

B * C = MACS * PeakSeq

0.941655

0.948495

12095

B * F = MACS * SISSRs

0.942113

0.950036

11003

B * E = MACS * CisGenome

0.949365

0.948955

14244

A * B = TRLocator * MACS

0.951392

0.950802

16921

A * D = TRLocator * QuEST

0.951877

0.950939

13270

A * C = TRLocator * PeakSeq

0.952759

0.956961

11573

A * F = TRLocator * SISSRs

0.959214

0.960584

10463

A * E = TRLocator * CisGenome

0.959687

0.959111

13155


Schweikert et al. BMC Genomics 2012 13(Suppl 8):S12   doi:10.1186/1471-2164-13-S8-S12

Open Data