Table 1 |
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|
mRNA-seq experiments from NCBI SRA. |
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|
Tissue/cell line |
Number of experiments |
SRA project ID |
Project name |
|
|
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|
Kidney |
3 |
SRP000225 |
Illumina sequencing human kidney RNA samples to study mRNA expression levels |
|
|
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|
Liver |
3 |
||
|
|
|||
|
GM12878 (Blood) |
7 |
SRP000228 |
RNASeq expression profiling for ENCODE project |
|
|
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|
Hep2G (Liver Carcinoma) |
4 |
||
|
|
|||
|
K562 (Leukemia) |
9 |
||
|
|
|||
|
Brain |
1 |
SRP000626 |
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing |
|
|
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|
Cerebral Cortex |
1 |
||
|
|
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|
Heart |
1 |
||
|
|
|||
|
Liver |
1 |
||
|
|
|||
|
Lung |
1 |
||
|
|
|||
|
Skeletal Muscle |
1 |
||
|
|
|||
|
Liver female 1 |
6 |
SRP001558 |
Sex-specific and lineage-specific alternative splicing in primates |
|
|
|||
|
Liver male 1 |
6 |
||
|
|
|||
|
Brain MAQC2 |
14 |
SRP001847 |
Evaluation of Statistical Methods for Normalization and Differential Expression in mRNA-Seq Experiments |
|
|
|||
|
UHR MAQC2 |
28 |
||
|
|
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|
Ozer et al. BMC Genomics 2012 13(Suppl 8):S11 doi:10.1186/1471-2164-13-S8-S11 |
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