Resolution:
standard / ## Figure 2.
Performance assessment for the Alt Event Finder. A) The total number of identified events increases with sequencing depth. Each dot
corresponds to a sample; the color and the shape of the sample denote its biological
condition; the regression line is displayed in dashed line with an R-squared value
of 0.9383; B) Performance for the Alt Event Finder pairing with a customized alignment pipeline and Cufflinks. The X-axis (rate of known
events) is defined by the number of overlapping events divided by the number of data-driven
events, and Y-axis (recall) is defined as the number of overlapping events divided
by the number of events in the official MISO annotation library; C) The rate of known
events does not change with sequencing depth; D) The recall rate of the Alt Event Finder increase linearly with the logarithmic transformation of the total mappable reads.
The regression line is displayed in dashed line with an R-squared value of 0.9684.
Zhou |