Table 2

Proportion of each serotype for pooling four serotypes of dengue templates and the calculated % detection of each pooled sample in both data sets

Source

Strain/Sort

Mix ratio of DEN2 RNA.

(%)

Mix ratio of four serotypes DENV purified DNA. (%)

Result from GS-FLX (%)


Data 1

Data 2


DENV1

Hawaii

-

18

18.72

16.55


DENV2

16681_mu1*

29.9

46

32.62

19.89

16681

10

12.48

10.25

NGC

5

8.14

6.06

16681-mu2*

1

0.71

0.63

16681-mu3*

0.1

0.00

0.00


DENV3

H87

-

18

20.16

21.65


DENV4

H241

-

18

7.17

24.96


Total

46

100

100

100


*Modified genotypes of strain 16681

Chin-inmanu et al. BMC Genomics 2012 13(Suppl 7):S7   doi:10.1186/1471-2164-13-S7-S7

Open Data