Table 1

Sequencing results from GS-FLX data sets: data 1 and data 2

Data 1

(5 fragments)

Data 2

(2 fragments)


Total No. of reads

54,440

134,441

Total bases

12,004,318

31,212,389

Average read length

221

232


Dereplicate sequencing result


Number of unique reads

45,184

116,561

Number of reads with N

2,709

8,221


Amount of unique reads by BLAST result


Success

45,167

116,549

Failure

17

12


Number of mapped reads for each serotype


serotype 1

8,374

19,217

serotype 2 strain 16681

20,490

35,731

serotype 2 strain NGC

3,642

7,036

serotype 3

9,020

25,142

serotype 4

3,208

28,987

Unclassified serotype/strain

433

436


Chin-inmanu et al. BMC Genomics 2012 13(Suppl 7):S7   doi:10.1186/1471-2164-13-S7-S7

Open Data