The performance comparison between iLOCi (I) and FastEpistasis (F) on epistatic models without marginal effects. The algorithm performance is shown as the percentage of accuracy, which is the number of simulated datasets (out of 100) in which the correct SNP pair is identified. The accuracy was tested for two different MAF (0.2, 0.4) and three different levels of heritability (A) 0.4, (B) 0.3, and (C) 0.2.
Piriyapongsa et al. BMC Genomics 2012 13(Suppl 7):S2 doi:10.1186/1471-2164-13-S7-S2