Table 2

Number of TP, FP, FN, and TN of miRNA identification on the three datasets

Data sets

Number of sequences

Number of identified miRNAs

TP

FP

FN

TN


TAIR10 cDNAs

30,707

223

164

59

12

30,472

miRBase 16.0 (Arabidopsis only)

213

195

195

0

18

0

Rfam 10 (all plant RNAs except miRNAs)

15,822

0

0

0

0

15,822

Total

46,742

418

359

59

30

46,294


Numnark et al. BMC Genomics 2012 13(Suppl 7):S16   doi:10.1186/1471-2164-13-S7-S16

Open Data