This article is part of the supplement: Eleventh International Conference on Bioinformatics (InCoB2012): Computational Biology
Proceedings
An analysis of the transcriptome of Teladorsagia circumcincta: its biological and biotechnological implications
1 Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
2 Department of Veterinary Science, The University of Melbourne, 250 Princes Highway, Werribee, Victoria 3030, Australia
3 The Genome Institute, Washington University School of Medicine, 444 Forest Park Boulevard, St. Louis, MO 63108, USA
4 Department of Genetics, Washington University School of Medicine, 444 Forest Park Boulevard, St. Louis, MO 63108, USA
5 Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 8 Medical Drive, Singapore 117597
BMC Genomics 2012, 13(Suppl 7):S10 doi:10.1186/1471-2164-13-S7-S10
Published: 13 December 2012Additional files
Additional File 1:
Comparison of rESTs from Teladorsagia circumcincta with C. elegans.
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Additional File 2:
Teladorsagia circumcincta homologues in Clade V of the phylum Nematoda, comprising Haemonchus contortus, Necator americanus, Nippostrongylus brasiliensis, Ostertagia ostertagi, Pristionchus pacificus, Ancylostoma caninum, Ancylostoma ceylanicum and Dictyocaulus viviparus.
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Additional File 3:
Metabolic pathways in Teladorsagia circumcincta mapped by Kyoto Encyclopedia of Genes and Genomes.
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Additional File 4:
GO Annotation for proteins.
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Additional File 5:
Secreted proteins predicted from rESTs from Teladorsagia circumcincta and their homologues and RNAi phenotypes.
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Additional File 6:
Secretory proteins predicted from Teladorsagia circumcincta rESTs - comparison with proteomic data.
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Additional File 7:
Transmembrane proteins predicted from rESTs from Teladorsagia circumcincta and their homologues and RNAi phenotypes.
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Additional File 8:
GO Annotation for secreted proteins.
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Additional File 9:
Pathway Analysis of secreted proteins using KOBAS.
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Additional File 10:
Pathway Analysis of secreted proteins using KAAS.
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Additional File 11:
Pathway analysis of secreted proteins obtained from SecretomeP.
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Additional File 12:
Protein Domain Analysis in Teladorsagia circumcincta.
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Additional File 13:
Top NR description of Teladorsagia circumcincta protein sequences.
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Additional File 14:
InterProScan analysis :representative protein domains/families.
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Additional File 15:
Comparison of secreted proteins from Teladorsagia circumcincta with C. elegans.
Format: XLS Size: 563KB Download file
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