Additional file 5.

Supplementary Figure 3: Comparison of SMAT with BLOSUM series in terms of Best Bidirectional Hits (BBH) The Best Bidirectional Hits (BBHs) were extracted from BLAST results of nine apicomplexan species studied here against Arabidopsis thaliana using BLOSUM62, BLOSUM90, SMAT50, SMAT60, SMAT70, SMAT80 and SMAT90 matrices. The colour of the bar corresponds to the matrix in the legend at topleft position of figure using which BBHs were calculated.

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Ali et al. BMC Genomics 2011 12(Suppl 3):S6   doi:10.1186/1471-2164-12-S3-S6