Number of Best Bidirectional Hits (BBHs) uniquely obtained by SMAT but not by BLOSUM62 The numbers of Best Bidirectional Hits (BBHs) of nine apicomplexan species were calculated against Arabidopsis thaliana which are detected by using SMAT50 but not by BLOSUM62 and vice-versa. Similarly BBHs uniquely detected by SMAT60, SMAT70, SMAT80 and SMAT90 matrices but not by BLSOUM62 and vice-versa were calculated. Here for all cases SMAT matrices detect higher number of unique BBHs.
Ali et al. BMC Genomics 2011 12(Suppl 3):S6 doi:10.1186/1471-2164-12-S3-S6