Table 8

C highly modulated genes in the "Carbohydrate metabolic process", "Secondary metabolic process" and "Transport" (carbohydrate and secondary metabolite) functional categories.

Gene_ID

Description

Metabolic Process

Profile

Expression

in C

FC EV/BV

FC H/BV


VIT_16s0100g00290

L-idonate dehydrogenase

Carbohydrate acid metabolism

2

E

-2.1

-6.5

VIT_18s0001g12180

CYP721A1

Electron transport

2

E

-3.9

-11.2

VIT_14s0060g00760

galactinol synthase

Sugar metabolism

2

E

-2.3

-5.2


VIT_18s0001g11470

CyP82A3

Electron transport

3

E

-2.1

-6.6

VIT_06s0004g04320

alcohol dehydrogenase

Fermentative metabolism

3

E

-1.8

-8.7

VIT_18s0001g05300

trehalose-6-phosphate phosphatase

Starch and sucrose metabolism

3

NE

-1.1

-5.7


VIT_05s0077g01300

Aldo-keto reductase

Aldehyde detoxification pathways (oxidative stress)

6

E

5.1

5.0

VIT_10s0003g05450

reticuline oxidase precursor

Alkaloid biosynthesis

6

E

2.8

10.1

VIT_16s0039g00880

CYP89H3

Electron transport

6

E

7.3

18.0

VIT_18s0001g12690

Isoflavone reductase protein 4

Isoflavone metabolism

6

E

2.0

6.2


VIT_06s0061g00280

2-phosphoglycerate kinase

Glycolysis

7

E

1.2

6.0

VIT_11s0065g00350

trans-cinnamate 4-monooxygenase (C4H)

Phenolic acid metabolism

7

E

0.8

5.6

VIT_05s0020g03140

Hexose Transporter 5 (VvHT5)

Secondary metabolite transport

7

E

1.1

9.0

VIT_07s0151g01070

copalyl diphosphate synthase

Diterpenoid biosynthesis

7

NE

1.2

11.2

VIT_04s0023g01290

UDP-glucose:flavonoid glucosyltransferase

Flavonoid metabolism

7

NE

1.8

18.9


For each gene (Gene_ID) the annotation (Description), the function (Metabolic Process), the cluster number (Profile), the expression in C (E = expressed but not highly modulated; NE = not expressed) and the Fold Change (FC) relative to the BV stage are reported.

Pastore et al. BMC Genomics 2011 12:631   doi:10.1186/1471-2164-12-631

Open Data