Table 7

CT highly modulated genes in "Transport" functional category specifically involved in carbohydrate and secondary metabolite translocation.

Gene_ID

Description

Metabolic Process

Profile

Expression

in C

FC EV/BV

FC H/BV


VIT_11s0052g00430

Glucose-6-phosphate/phosphate-translocator

Carbohydrate transport

1

E

-6.0

-1.9

VIT_08s0217g00010

Succinate/fumarate mitochondrial transporter

Carbohydrate transport

1

E

-5.30

-2.86

VIT_03s0063g02250

POLYOL TRANSPORTER 5 (VIT_PMT5)

Carbohydrate transport

1

E

-7.1

-1.2

VIT_07s0104g00830

Sugar transporter ERD6-like 7

Carbohydrate transport

1

E

-9.5

-0.6

VIT_18s0001g08220

SUCROSE TRANSPORTER 11 (VIT_SUC11)

Carbohydrate transport

1

E

-5.6

-1.4


VIT_14s0108g00430

ABC transporter B member 16

Secondary metabolite transport

2

E

-3.9

-7.3

VIT_11s0052g01560

MATE efflux family protein

Secondary metabolite transport

2

E

-1.5

-6.1

VIT_07s0031g02550

ABC transporter G member 14

Secondary metabolite transport

2

NE

-9.2

-19.2

VIT_08s0056g00780

MATE efflux family protein

Secondary metabolite transport

2

NE

-5.8

-12.5

VIT_12s0059g02180

MATE efflux family protein

Secondary metabolite transport

2

NE

-7.7

-12.0


VIT_18s0001g07320

2-oxoglutarate/malate carrier protein, Mitochondrial

Carbohydrate transport

4

E

-12.11

-7.35

VIT_18s0076g00250

SUCROSE TRANSPORTER 27 (VIT_SUC27)

Carbohydrate transport

4

E

-16.5

-17.2


VIT_07s0031g02470

dicarboxylate/tricarboxylate carrier (DTC)

Carbohydrate transport

5

NE

19.03

2.69

VIT_06s0061g01460

ABC transporter G member 22

Secondary metabolite transport

5

NE

15.8

2.0

VIT_07s0031g00750

MATE efflux family protein

Secondary metabolite transport

5

NE

8.6

0.9

VIT_11s0052g01540

MATE efflux family protein

Secondary metabolite transport

5

NE

14.5

1.8


VIT_07s0005g04680

ABC transporter C member 9

Secondary metabolite transport

6

NE

4.6

6.7

VIT_09s0002g05360

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

6

NE

5.2

16.0

VIT_09s0002g05370

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

6

NE

9.7

17.0

VIT_09s0002g05400

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

6

NE

9.5

15.4

VIT_09s0002g05410

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

6

NE

3.3

8.4

VIT_09s0002g05440

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

6

NE

4.0

10.6


VIT_18s0001g11760

MATE efflux family protein

Secondary metabolite transport

7

E

0.8

5.1

VIT_09s0002g05490

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

7

NE

1.8

15.6


VIT_09s0002g02440

ABC transporter C member 12

Secondary metabolite transport

8

E

5.8

3.3

VIT_00s0188g00090

dicarboxylate/tricarboxylate carrier (DTC)

Carbohydrate transport

8

NE

32.96

15.30

VIT_08s0007g07270

dicarboxylate/tricarboxylate carrier (DTC)

Carbohydrate transport

8

NE

5.95

3.07

VIT_19s0015g00010

ABC transporter C member 9

Secondary metabolite transport

8

NE

9.9

8.5

VIT_19s0015g00040

ABC transporter C member 9

Secondary metabolite transport

8

NE

8.0

6.9

VIT_13s0101g00010

ABC transporter F member 2

Secondary metabolite transport

8

NE

56.9

23.4

VIT_03s0180g00300

ABC transporter F member 2

Secondary metabolite transport

8

NE

23.2

7.0

VIT_15s0024g00840

ABC transporter F member 2

Secondary metabolite transport

8

NE

55.7

17.2

VIT_09s0002g05430

ABC transporter g family pleiotropic drug resistance 12 PDR12

Secondary metabolite transport

8

NE

5.9

4.4

VIT_14s0068g01740

ABCNAP14

Secondary metabolite transport

8

NE

12.5

7.1

VIT_13s0019g05200

MATE efflux family protein

Secondary metabolite transport

8

NE

6.8

6.2

VIT_10s0042g00310

MRP-like ABC transporter

Secondary metabolite transport

8

NE

23.2

13.4


For each gene (Gene_ID) the annotation (Description), the function (Metabolic Process), the cluster number (Profile), the expression in C (E = expressed but not highly modulated; NE = not expressed) and the Fold Change (FC) referred to BV are reported.

Pastore et al. BMC Genomics 2011 12:631   doi:10.1186/1471-2164-12-631

Open Data