Additional file 4.

Subset of transcripts showing a difference in basal expression level between V. vinifera and V. riparia at both the 12 and 24 h time points after mock-inoculation with distilled water. The file contains a list of transcripts showing statistically significant differential expression, with a False Discovery Rate (FDR) ≤5%. The fold change of V. vinifera vs. V. riparia expression levels (Fold Change Vv/Vr) is reported, along with the q-value (%) indicating the FDR. A separate list reports the subset of defense-related genes, functionally categorized as 'resistance', 'stress', 'cell wall' and 'secondary metabolism' considered in Additional file 5.

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Polesani et al. BMC Genomics 2010 11:117   doi:10.1186/1471-2164-11-117