This article is part of the supplement: Eighth International Conference on Bioinformatics (InCoB2009): Computational Biology

Open Access Proceedings

Alternative paths in HIV-1 targeted human signal transduction pathways

Sivaraman Balakrishnan1, Oznur Tastan1, Jaime Carbonell1 and Judith Klein-Seetharaman12*

Author Affiliations

1 Language Technologies Institute, School of Computer Science, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA15213, USA

2 Department of Structural Biology, University of Pittsburgh School of Medicine, 3501 Fifth Avenue, Pittsburgh, PA15260, USA

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BMC Genomics 2009, 10(Suppl 3):S30  doi:10.1186/1471-2164-10-S3-S30

Published: 3 December 2009

Additional files

Additional file 1:

Table S1. This file lists the human proteins in each pathway, along with the information if and if yes which HIV-1 proteins interact with them, if they are siRNA genes or if they are drug targets.

Format: XLS Size: 3.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 2:

Table S2. This file contains statistics on number of paths, HIV-1, siRNA genes, and drug targets for pathways from the NCI PID and the Reactome databases.

Format: XLS Size: 211KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data