Figure 4.

Example MINER gene interaction network. Screen capture from MINER showing a section of a gene interaction network generated by MINER from two trees, one of which appears in Figure 3. Regulatory relationships identified in the learned tree are represented as edges in the network, with interactions shown in either red (for up-regulation) or green (for down-regulation) acting on a target gene; edges shown in black are between two non-target genes and indicate that there may be a regulatory relationship or interaction between these genes but the nature of this relationship is not inferable from the component trees.

Kadupitige et al. BMC Genomics 2009 10(Suppl 3):S17   doi:10.1186/1471-2164-10-S3-S17