Table 2

Top 10 scoring profiles for test profile GSM12641(liver) with cross-platform search database

Scoring method

Similarity score

Profile ID

Cell type

Platform ID

Study ID


CGSEP

0.31

GSM19143

colon

GPL97

GSE1152

0.3

GSM19142

ileum

GPL97

GSE1152

0.28

GSM11827

kidney

GPL97

GSE781

0.25

GSM11810

kidney

GPL97

GSE781

0.24

GSM4230

skeletal

GPL246

GSE465

0.24

GSM4231

skeletal

GPL246

GSE465

0.23

GSM18443

cardiac

GPL570

GSE1145

0.22

GSM18809

placenta

GPL1074

GSE1133

0.22

GSM18798

prostate

GPL1074

GSE1133

0.22

GSM18711

leukocyte

GPL1074

GSE1133

PEPC

0.43

GSM2831

liver

GPL91

GSE96

0.43

GSM12640

liver

GPL92

GSE803

0.43

GSM2854

trachea

GPL91

GSE96

0.42

GSM2858

spleen

GPL91

GSE96

0.42

GSM18949

lung

GPL96

GSE1133

0.42

GSM18950

lung

GPL96

GSE11750

0.42

GSM2835

spleen

GPL91

GSE96

0.42

GSM2844

liver

GPL91

GSE96

0.41

GSM2834

salivary

GPL91

GSE96

0.41

GSM12718

liver

GPL8300

GSE803


Keum et al. BMC Genomics 2009 10(Suppl 3):S15   doi:10.1186/1471-2164-10-S3-S15

Open Data