Table 1

Top 10 scoring profiles for test profile GSM18935 (thalamus) with overall search database.

Scoring method

Similarity score

Profile ID

Cell type

Platform ID

Study ID


CGSEP

0.62

GSM12688

brain

GPL8300

GSE803

0.61

GSM12708

brain

GPL8300

GSE803

0.6

GSM12703

spinal

GPL8300

GSE803

0.59

GSM12753

spinal

GPL8300

GSE803

0.58

GSM2885

caudate

GPL91

GSE96

0.58

GSM2820

cerebral

GPL91

GSE96

0.58

GSM2886

caudate

GPL91

GSE96

0.58

GSM2881

thalamus

GPL91

GSE96

0.58

GSM18443

cardiac

GPL570

GSE1145

0.57

GSM2897

thalamus

GPL91

GSE96

PEPC

0.86

GSM2881

thalamus

GPL91

GSE96

0.86

GSM2897

thalamus

GPL91

GSE96

0.84

GSM2885

caudate

GPL91

GSE96

0.83

GSM2886

caudate

GPL91

GSE96

0.83

GSM2884

amygdala

GPL91

GSE96

0.83

GSM2820

cerebral

GPL91

GSE96

0.83

GSM2828

brain

GPL91

GSE96

0.82

GSM2874

amygdala

GPL91

GSE96

0.82

GSM12708

brain

GPL8300

GSE803

0.82

GSM12688

brain

GPL8300

GSE803


Keum et al. BMC Genomics 2009 10(Suppl 3):S15   doi:10.1186/1471-2164-10-S3-S15

Open Data