The accuracy of minor allele frequency estimation produced by MapNext. The mean (SD) of minor allele frequencies are given. QV, NQV, MMAF and MC are set 25, 20, 0.01 and 50 respectively. (a) The sequencing coverage is 2× per individual. (b) The sequencing coverage is 12× per individual.
Bao et al. BMC Genomics 2009 10(Suppl 3):S13 doi:10.1186/1471-2164-10-S3-S13