Table 9

Unique and interesting words for the promoter sets. The words for the unidirectional and bidirectional promoter set which exhibit a significant score-based distance to the other data set.

(a) Unidirectional

(b) Bidirectional


Word

Unidirectional

Bidirectional

Distance

Word

Unidirectional

Bidirectional

Distance


ACCCGCCT

6.87826

-0.0263597

4.882303411

TCCCGGGA

-0.0850495

5.60208

-4.021407835


GGGGCTGC

4.49226

-1.0872000

3.945274001

GGCCCGCC

0

5.36123

-3.790962089


CGGCGGCG

4.01229

-1.3139900

3.766248706

CGCGGCCG

-0.3641650

4.91487

-3.732841447


AGGAAACA

4.92885

0.1254760

3.396498328

TCCCGGCT

0

5.14921

-3.641041309


CTTCTTTC

5.19624

0.4219750

3.375915157

CAGGGGCC

0

5.13315

-3.629685174


TCCGCCGG

3.76460

-0.8986470

3.297413576

AGGGCCGT

0

5.10145

-3.607269889


TCTTCTTC

4.48225

0

3.169429370

TCTGAGGA

0

4.99234

-3.530117468


ATTAAAAT

4.29023

0

3.033650726

CGTGGGGG

0.0180292

4.92572

-3.470261445


GGGGAGTA

4.44222

0.3737000

2.876878081

TCTGGGAT

0

4.81380

-3.403870623


CGCCCCTT

3.90482

-0.1463740

2.864626749

AGGGAGGG

0

4.72230

-3.339170353


TTTTTTGA

4.01229

0

2.837117467

AGAAAAGA

0

4.66976

-3.302018963


TTTCTCCA

3.96242

0

2.801854052

GGGCCAGG

0

4.62990

-3.273833686


AGCCGGCT

3.94551

0

2.789896876

ACTCCAGC

0

4.53045

-3.203511917


TTGGTCTC

3.65176

-0.2608830

2.766656398

CCCCAGCT

-0.9904730

3.48143

-3.162112936


GCGCCGCG

3.81433

0

2.697138609

CGGGCCGA

0

4.45426

-3.149637451


ATTCCCAG

3.80733

0

2.692188861

TCCGCCGC

-0.8886350

3.55395

-3.141381979


GCAGGGCG

4.66535

0.8645290

2.687586303

TGCCCGCG

-0.3137370

4.10844

-3.126951344


GAGGGGCG

3.03108

-0.7557900

2.677721456

TGCGGAAT

0

4.41371

-3.120964271


CCCCCGCG

3.55664

-0.1908410

2.649869227

GCCGGCGA

0

4.33335

-3.064141170


AGGGGAGC

3.15866

-0.5635770

2.632019024

CAGCAGCC

-0.0679120

4.10418

-2.950114545


TGCGCCGA

3.68519

0

2.605822839

CGAGGAGA

0

4.09415

-2.895001228


CCGCGCCC

2.25420

-1.4189300

2.597295131

CGCAGGCG

-0.2779570

3.74626

-2.845551130


GTGCGTTT

3.66247

0

2.589757373

TTCCACCC

0

4.02098

-2.843262225


CTGGGAGC

3.36673

-0.2940760

2.588580747

TCGCCCCA

0

3.94598

-2.790229216


TGCCTCCC

3.34992

-0.2629130

2.554658714

GGGGCCGG

0.8548330

4.76672

-2.766121825


Lichtenberg et al. BMC Genomics 2009 10(Suppl 1):S18   doi:10.1186/1471-2164-10-S1-S18

Open Data