Table 3

cDNA evidence for transcription of all three WC1 distinct gene structure typesa

cDNA cloneb


Gene Designation

WC1.1

CH534

CH501

CH496

CH505

CH504

CH486

CH525


Type I

WC1.1

X

99.0

92.3

85.3

82.0

88.5

67.4

95.3

WC1-3

92.1

91.8

87.0

74.0

73.0

86.0

77.7

86.6

WC1-5

97.4

97.1

92.1

85.8

82.6

88.7

67.5

95.6

WC1-8

90.6

90.1

90.5

87.9

80.5

89.2

66.1

91.1

WC1-1

89.0

88.3

98.0

83.8

80.6

93.5

67.9

89.7

WC1-13

88.5

87.8

96.2

83.6

80.4

93.8

67.6

88.9

WC1-2

91.2

91.1

94.8

87.1

81.0

94.6

66.3

97.0

WC1-4

85.7

85.1

84.8

98.7

93.0

84.0

67.4

84.4

WC1-7

85.8

85.1

84.8

94.9

90.1

84.2

67.3

84.3

WC1-6

83.8

85.6

88.1

82.2

82.2

84.6

79.2

86.9

Type II

WC1-9

82.2

81.6

78.6

92.9

98.5

80.4

67.2

79.5

WC1-10

83.1

82.6

80.4

81.7

82.7

81.3

69.5

80.5

WC1-12

83.6

83.0

81.1

81.4

83.2

81.3

68.9

80.4

Type III

WC1-11

67.7

67.5

67.7

67.7

67.7

66.9

99.1

67.1


a Percent identity is shown for the deduced amino acid sequences of WC1 genes and cDNA clones.

b Bold values indicate cDNA clones classified as WC1 genes.

Herzig and Baldwin BMC Genomics 2009 10:191   doi:10.1186/1471-2164-10-191

Open Data