Table 3

Top 30 upregulated genes, in IVF blastocysts compared to CT blastocysts sorted by P-value

Probe set ID

Gene Title

Gene ID

P value

Fold change IVF/CT1

Fold change IVF/CT4


Bt.28010.1.S1_at

Peptidase inhibitor 3, skin-derived (SKALP)

PI3

0.000000

5.58

9.12

Bt.21013.1.S1_at

Polo-like kinase 3 (Drosophila)

PLK3

0.000001

3.99

9.09

Bt.28223.1.S1_at

20-beta-hydroxysteroid dehydrogenase-like

MGC127133

0.000009

2.13

1.71

Bt.9525.1.A1_at

Zinc finger protein 183

ZNF183

0.000057

2.13

3.62

Bt.2892.1.S1_at

Fatty acid binding protein 7, brain

FABP7

0.00014

1.22

6.35

Bt.4430.1.S2_at

ATPase, H+ transporting, lysosomal V0 subunit a1

ATP6V0A1

0.00014

1.89

1.93

Bt.5154.1.S1_at

Heat shock 70 kDa protein 1A

HSPA1A

0.0002

4.14

7.17

Bt.15787.1.S1_at

Bcl-2 inhibitor of transcription

BIT1

0.0002

1.49

2.01

Bt.13544.2.S1_a_at

Zinc finger protein 410

ZNF410

0.0003

2.01

1.90

Bt.2005.1.S1_at

LSM1 homolog, U6 small nuclear RNA associated

LSM1

0.0003

1.86

1.57

Bt.16291.1.A1_at

Testis expressed 12

TEX12

0.0004

3.40

3.64

Bt.27854.1.S1_at

Nuclear factor, interleukin 3 regulated

NFIL3

0.0004

1.72

3.08

Bt.13928.2.S1_a_at

Sodium channel modifier 1

SCNM1

0.0004

2.02

4.05

Bt.15334.2.A1_at

Signal transducer and activator of transcription 3

STAT3

0.0005

4.71

16.06

Bt.12506.1.S1_at

Serpin peptidase inhibitor, E member 2

SERPINE2

0.0005

1.52

1.42

Bt.20204.1.S1_at

Sjogren's syndrome/scleroderma autoantigen

SSSCA1

0.0005

1.61

2.93

Bt.20199.1.A1_at

DEAD (Asp-Glu-Ala-Asp) polypeptide 56

DDX56

0.0006

1.45

1.79

Bt.3359.1.S1_at

General transcription factor IIF, polypeptide

GTF2F1

0.0009

1.53

1.98

Bt.2958.1.A1_at

Ubiquitin-conjugating enzyme E2A (RAD6 homolog)

UBE2A

0.001

2.03

3.08

Bt.3002.1.S1_at

BUB3 budding uninhibited by benzimidazoles 3

BUB3

0.001

1.27

1.62

Bt.6087.1.S1_at

Transmembrane 4 superfamily member 1

TM4SF1

0.001

2.29

6.62

Bt.4737.1.S2_s_at

Prion protein

PRNP

0.001

2.20

2.99

Bt.1854.1.S1_at

Intraflagellar transport 20 homolog (Chlamydomonas)

IFT20

0.001

1.65

2.30

Bt.5340.1.S1_s_at

Nucleoside-diphosphate kinase NBR-A

NBR-A

0.002

1.42

1.76

Bt.8.1.S1_at

Keratin 10 (epidermolytic hyperkeratosis)

KRT10

0.002

1.98

3.39

Bt.27095.1.S1_at

Collaborates/cooperates with ARF protein

CARF

0.002

1.53

2.97

Bt.5039.1.S1_at

High mobility group nucleosomal binding domain 3

HMGN3

0.002

1.72

2.96

Bt.27874.1.S1_s_at

Phosphatidylserine receptor

PTDSR

0.002

2.29

2.99

Bt.4595.1.S1_at

TSR2, 20S rRNA accumulation, homolog

TSR2

0.002

2.08

2.59

Bt.1505.1.S1_at

Sin3A-associated protein, 18 kDa

SAP18

0.003

2.24

2.48


Genes were analyzed by one-way ANOVA.

Rodriguez-Osorio et al. BMC Genomics 2009 10:190   doi:10.1186/1471-2164-10-190

Open Data