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Open Access Open Badges Research article

Genome wide signatures of positive selection: The comparison of independent samples and the identification of regions associated to traits

William Barendse1*, Blair E Harrison1, Rowan J Bunch1, Merle B Thomas1 and Lex B Turner2

Author Affiliations

1 Commonwealth Scientific and Industrial Research Organization, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, 4067, Queensland, Australia

2 Queensland Department of Primary Industries and Fisheries, Mutdapilly Research Station, MS 825 Peak Crossing, 4306, Queensland, Australia

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BMC Genomics 2009, 10:178  doi:10.1186/1471-2164-10-178

Published: 24 April 2009

Additional files

Additional File 1:

Plot of experiment-wide statistics for allele frequency, average heterozygosity and FST. Two plots one above the other, the upper plot shows the average allele frequency plotted against the average heterozygosity for each SNP, the lower plot shows average heterozygosity plotted against FST for each SNP.

Format: JPEG Size: 1.3MB Download file

Open Data

Additional File 2:

SNP with extreme FST values in both the Bovine HapMap and Australian data sets. A table consisting of six columns listing the dbSNP identifier, the chromosome, the position in bp in the Btau 4.0 assembly, the per locus FST in the Australian and then the Bovine HapMap data, and the number of 1 Mb blocks per chromosome with loci with high or low FST.

Format: PDF Size: 76KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data